RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 UHRF1Q96T88 793 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-205ENST00000538545 KLHL4Q9C0H6 718 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 CCDC177Q9NQR7 707 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-205ENST00000538545 KLHL20Q9Y2M5 609 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 SCN2AQ99250 2005 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 PIPSLA2A3N6 862 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 PDZK1P1A8MUH7 402 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 H7BY64 318 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 RTCAO00442 366 aaKnown RBP13.62□□□□□ -0.23
ACTN1-205ENST00000538545 KCNH1O95259 989 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 C8BP07358 591 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 HOXB3P14651 431 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-205ENST00000538545 MRPL19P49406 292 aaKnown RBP13.62□□□□□ -0.23
ACTN1-205ENST00000538545 GRSF1Q12849 480 aaKnown RBP eCLIP13.62□□□□□ -0.23
ACTN1-205ENST00000538545 MAD2L1Q13257 205 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-205ENST00000538545 CYP51A1Q16850 503 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 UGT8Q16880 541 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 HORMAD1Q86X24 394 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 PDSS2Q86YH6 399 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 SFTPA2Q8IWL1 248 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 DTWD1Q8N5C7 304 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 FAM86B1Q8N7N1 296 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 OR2T34Q8NGX1 318 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 WDR48Q8TAF3 677 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 PRAP1Q96NZ9 151 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 CIB1Q99828 191 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 SGPP1Q9BX95 441 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 REXO4Q9GZR2 422 aaKnown RBP13.62□□□□□ -0.23
ACTN1-205ENST00000538545 SERHLQ9NQF3 203 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 UTS2RQ9UKP6 389 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 A0A0G2JN53 185 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 SLC35G4P0C7Q5 338 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 LAMP1P11279 417 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 HSD17B1P14061 328 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 ACADSP16219 412 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 HNF4AP41235 474 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 CLDN8P56748 225 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 PWP1Q13610 501 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 RBBP5Q15291 538 aaKnown RBP13.61□□□□□ -0.23
ACTN1-205ENST00000538545 PYCR3Q53H96 274 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 ARMCX6Q7L4S7 300 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 GALNT10Q86SR1 603 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 PGBD3Q8N328 593 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 SLC5A11Q8WWX8 675 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 SH3KBP1Q96B97 665 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 ANKRD27Q96NW4 1050 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 APOOQ9BUR5 198 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 CARS2Q9HA77 564 aaKnown RBP13.61□□□□□ -0.23
ACTN1-205ENST00000538545 PHPT1Q9NRX4 125 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-205ENST00000538545 SPATA6Q9NWH7 488 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-205ENST00000538545 DYRK1BQ9Y463 629 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 SLCO1B1Q9Y6L6 691 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 ABCA7Q8IZY2 2146 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 MDC1Q14676 2089 aaKnown RBP13.61□□□□□ -0.23
ACTN1-205ENST00000538545 GNG14A0A1W2PPG7 69 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 H0YIV9 168 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 PDLIM1O00151 329 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 PPM1DO15297 605 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 ACADMP11310 421 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 MYCLP1P12525 358 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-205ENST00000538545 S100A3P33764 101 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 TPMTP51580 245 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 ZNF542PQ5EBM4 170 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 COQ5Q5HYK3 327 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 PRAMEF14Q5SWL7 426 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 PRAMEF13Q5VWM6 474 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 MED27Q6P2C8 311 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 ZNF551Q7Z340 670 aaPredicted RBP13.61□□□□□ -0.23
ACTN1-205ENST00000538545 DPP10Q8N608 796 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 OR5K2Q8NHB8 316 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 TSPEARQ8WU66 669 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 FIG4Q92562 907 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 RAD51AP1Q96B01 352 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 ZNF583Q96ND8 569 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 SLC29A1Q99808 456 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 DTNAQ9Y4J8 743 aa13.61□□□□□ -0.23
ACTN1-205ENST00000538545 KMOO15229 486 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 CPSF4O95639 269 aaKnown RBP13.6□□□□□ -0.23
ACTN1-205ENST00000538545 ZCCHC18P0CG32 403 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 C1GALT1C1LP0DN25 315 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 OGFRL1Q5TC84 451 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-205ENST00000538545 ENPP7Q6UWV6 458 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 RLN3Q8WXF3 142 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 MENTQ9BUN1 341 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 EBF1Q9UH73 591 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 PCDHGA11Q9Y5H2 935 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 SAC3D1A6NKF1 404 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 ANXA4P09525 319 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-205ENST00000538545 PIM1P11309 404 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-205ENST00000538545 TRAP1Q12931 704 aaKnown RBP13.6□□□□□ -0.23
ACTN1-205ENST00000538545 TBCELQ5QJ74 424 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 GLYATQ6IB77 296 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 PRMT9Q6P2P2 845 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 VN1R5Q7Z5H4 357 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 DCUN1D3Q8IWE4 304 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 RIMKLAQ8IXN7 391 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 FAM160A2Q8N612 972 aaPredicted RBP13.6□□□□□ -0.23
ACTN1-205ENST00000538545 CENPKQ9BS16 269 aa13.6□□□□□ -0.23
ACTN1-205ENST00000538545 PAIP1Q9H074 479 aaKnown RBP13.6□□□□□ -0.23
ACTN1-205ENST00000538545 FANCMQ8IYD8 2048 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms