RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 NEIL2Q969S2 332 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 NCLNQ969V3 563 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 NUS1Q96E22 293 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 ASB16Q96NS5 453 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 OR2AG1Q9H205 316 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 TMEM245Q9H330 911 aa13.55□□□□□ -0.24
LIMK1-208ENST00000538333 FAM120CQ9NX05 1096 aaKnown RBP13.55□□□□□ -0.24
LIMK1-208ENST00000538333 C5orf42Q9H799 3197 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 CCDC160A6NGH7 325 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 G3V2T6 193 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 YY2O15391 372 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 PAPLNO95428 1278 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 NFATC1O95644 943 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 THRBP10828 461 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 ADRB3P13945 408 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 SH3BGRP55822 239 aaPredicted RBP13.54□□□□□ -0.24
LIMK1-208ENST00000538333 PPP2R2BQ00005 443 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 DPTQ07507 201 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 LAPTM5Q13571 262 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 ELAVL3Q14576 367 aaKnown RBP13.54□□□□□ -0.24
LIMK1-208ENST00000538333 TMC5Q6UXY8 1006 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 ZNF547Q8IVP9 402 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 CFAP206Q8IYR0 622 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 CHPFQ8IZ52 775 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 HUS1BQ8NHY5 278 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 POP5Q969H6 163 aaKnown RBP13.54□□□□□ -0.24
LIMK1-208ENST00000538333 LINC00615Q96LM1 132 aaPredicted RBP13.54□□□□□ -0.24
LIMK1-208ENST00000538333 RDH12Q96NR8 316 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 OSBPL10Q9BXB5 764 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 ZCCHC2Q9C0B9 1178 aaKnown RBP13.54□□□□□ -0.24
LIMK1-208ENST00000538333 USE1Q9NZ43 259 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 DEC1Q9P2X7 70 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 BTBD3Q9Y2F9 522 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 HEPACAM2A8MVW5 462 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 FPGTO14772 594 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 COX7A2P14406 83 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 HOXB6P17509 224 aaKnown RBP13.54□□□□□ -0.24
LIMK1-208ENST00000538333 GPX2P18283 190 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 SLC5A2P31639 672 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 MAGEA2P43356 314 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 TBPL1P62380 186 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 ZNF234Q14588 700 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 EIF4HQ15056 248 aaKnown RBP13.54□□□□□ -0.24
LIMK1-208ENST00000538333 ZIK1Q3SY52 487 aaPredicted RBP13.54□□□□□ -0.24
LIMK1-208ENST00000538333 RAET1GQ6H3X3 334 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 CES5AQ6NT32 575 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 TRAPPC5Q8IUR0 188 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 CLEC4FQ8N1N0 589 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 ZCCHC7Q8N3Z6 543 aaKnown RBP13.54□□□□□ -0.24
LIMK1-208ENST00000538333 SVOPLQ8N434 492 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 C1orf52Q8N6N3 182 aaKnown RBP13.54□□□□□ -0.24
LIMK1-208ENST00000538333 PJA1Q8NG27 643 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 CHTF18Q8WVB6 975 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 WDR34Q96EX3 536 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 MPP4Q96JB8 637 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 PANX1Q96RD7 426 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 ATXN10Q9UBB4 475 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 KCNE2Q9Y6J6 123 aa13.54□□□□□ -0.24
LIMK1-208ENST00000538333 CLIC1O00299 241 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 SCAMP2O15127 329 aaKnown RBP13.53□□□□□ -0.24
LIMK1-208ENST00000538333 MMP20O60882 483 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 LAMP1P11279 417 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 GPR1P46091 355 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 MYBPC3Q14896 1274 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 PDE12Q6L8Q7 609 aaKnown RBP13.53□□□□□ -0.24
LIMK1-208ENST00000538333 CAMKMTQ7Z624 323 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 LRRC56Q8IYG6 542 aaPredicted RBP13.53□□□□□ -0.24
LIMK1-208ENST00000538333 CLECL1Q8IZS7 167 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 HS3ST5Q8IZT8 346 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 PGBD3Q8N328 593 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 PYURFQ96I23 114 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 SAMD11Q96NU1 681 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 MUS81Q96NY9 551 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 SGPP1Q9BX95 441 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 YTHDF1Q9BYJ9 559 aaKnown RBP13.53□□□□□ -0.24
LIMK1-208ENST00000538333 TRIM39Q9HCM9 518 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 THEGQ9P2T0 379 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 SH2B3Q9UQQ2 575 aa13.53□□□□□ -0.24
LIMK1-208ENST00000538333 EVPLLA8MZ36 301 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 CCNDBP1O95273 360 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 KCNK5O95279 499 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 NPPBP16860 134 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 ENGP17813 658 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 PCSK6P29122 969 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 CDK9P50750 372 aaKnown RBP13.52□□□□□ -0.24
LIMK1-208ENST00000538333 PLCL1Q15111 1095 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 TMEM52BQ4KMG9 183 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 CAPN13Q6MZZ7 669 aaPredicted RBP13.52□□□□□ -0.24
LIMK1-208ENST00000538333 TMEM179BQ7Z7N9 219 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 TMPRSS11BQ86T26 416 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 SMARCD2Q92925 531 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 TOR3AQ9H497 397 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 SMURF2Q9HAU4 748 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 AASDHPPTQ9NRN7 309 aa13.52□□□□□ -0.24
LIMK1-208ENST00000538333 RSL24D1Q9UHA3 163 aaKnown RBP13.52□□□□□ -0.24
LIMK1-208ENST00000538333 C17orf113A0A1B0GUU1 675 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 GABRR3A8MPY1 467 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 MYO1DO94832 1006 aa13.52□□□□□ -0.25
LIMK1-208ENST00000538333 EPN2O95208 641 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms