RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 MBD2Q9UBB5 411 aa10.91□□□□□ -0.66
LINC00346-201ENST00000538077 PITPNM1O00562 1244 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 KMOO15229 486 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 NPHS1O60500 1241 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 CPNE6O95741 557 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 ITGB1P05556 798 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 NDUFS1P28331 727 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 RFC2P35250 354 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 CLRN1P58418 232 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 KLHL26Q53HC5 615 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 RBM20Q5T481 1227 aaKnown RBP10.9□□□□□ -0.66
LINC00346-201ENST00000538077 ZNF662Q6ZS27 426 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 TTLQ8NG68 377 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 GAL3ST3Q96A11 431 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 FCRL5Q96RD9 977 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 ZNF180Q9UJW8 692 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 PLCL2Q9UPR0 1127 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 FEZF1A0PJY2 475 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 CSNK2A2P19784 350 aaPredicted RBP10.9□□□□□ -0.66
LINC00346-201ENST00000538077 ITPRIPL2Q3MIP1 535 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 METTL21CQ5VZV1 264 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 TPRG1Q6ZUI0 275 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 LRRC57Q8N9N7 239 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 TRPV1Q8NER1 839 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 S100ZQ8WXG8 99 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 TFGQ92734 400 aaPredicted RBP10.9□□□□□ -0.66
LINC00346-201ENST00000538077 SLC39A3Q9BRY0 314 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 OR8D2Q9GZM6 311 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 TFB2MQ9H5Q4 396 aaKnown RBP10.9□□□□□ -0.66
LINC00346-201ENST00000538077 SDHAF3Q9NRP4 125 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 SMPD3Q9NY59 655 aaPredicted RBP10.9□□□□□ -0.66
LINC00346-201ENST00000538077 VNN3Q9NY84 501 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 RBMX2Q9Y388 322 aaKnown RBP10.9□□□□□ -0.66
LINC00346-201ENST00000538077 TOR1BO14657 336 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 HSDL2Q6YN16 418 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 C14orf80Q86SX3 495 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 OXR1Q8N573 874 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 NKD2Q969F2 451 aaPredicted RBP10.9□□□□□ -0.66
LINC00346-201ENST00000538077 ACDQ96AP0 544 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 CDKN2AIPNLQ96HQ2 116 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 ZSWIM3Q96MP5 696 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 ANKRD27Q96NW4 1050 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 CORO1CQ9ULV4 474 aaPredicted RBP10.9□□□□□ -0.66
LINC00346-201ENST00000538077 SLC45A1Q9Y2W3 748 aa10.9□□□□□ -0.66
LINC00346-201ENST00000538077 RFPL2O75678 378 aa10.9□□□□□ -0.67
LINC00346-201ENST00000538077 TMEM63AO94886 807 aa10.9□□□□□ -0.67
LINC00346-201ENST00000538077 HSD17B2P37059 387 aa10.9□□□□□ -0.67
LINC00346-201ENST00000538077 ARRB1P49407 418 aaPredicted RBP10.9□□□□□ -0.67
LINC00346-201ENST00000538077 MAN2A2P49641 1150 aa10.9□□□□□ -0.67
LINC00346-201ENST00000538077 OR12D2P58182 307 aa10.9□□□□□ -0.67
LINC00346-201ENST00000538077 CDKL1Q00532 357 aa10.9□□□□□ -0.67
LINC00346-201ENST00000538077 NNATQ16517 81 aa10.9□□□□□ -0.67
LINC00346-201ENST00000538077 TRIB2Q92519 343 aa10.9□□□□□ -0.67
LINC00346-201ENST00000538077 TMEM203Q969S6 136 aa10.9□□□□□ -0.67
LINC00346-201ENST00000538077 C7orf26Q96N11 449 aa10.9□□□□□ -0.67
LINC00346-201ENST00000538077 SMOQ99835 787 aa10.9□□□□□ -0.67
LINC00346-201ENST00000538077 STRADBQ9C0K7 418 aa10.9□□□□□ -0.67
LINC00346-201ENST00000538077 IL1RAPQ9NPH3 570 aa10.9□□□□□ -0.67
LINC00346-201ENST00000538077 SCELO95171 688 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 PIM1P11309 404 aaPredicted RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 ECHS1P30084 290 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 OGDHQ02218 1023 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 SLC3A1Q07837 685 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 LAPTM4BQ86VI4 370 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF761Q86XN6 746 aaPredicted RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 OR4F6Q8NGB9 312 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 IRF7Q92985 503 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 COMMD3Q9UBI1 195 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 GATBO75879 557 aaKnown RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 DIRAS1O95057 198 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 C6orf47O95873 294 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 PAK4O96013 591 aaPredicted RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 RASGEF1BQ0VAM2 473 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 E2F2Q14209 437 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 CHRDL2Q6WN34 429 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 NANOGNBQ7Z5D8 188 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 CROCCP3Q8IVE0 287 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 FOXRED2Q8IWF2 684 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 C1orf216Q8TAB5 229 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 ZNF384Q8TF68 577 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 C12orf42Q96LP6 360 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 SLC32A1Q9H598 525 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 AKTIPQ9H8T0 292 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 ETAA1Q9NY74 926 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 GNG8Q9UK08 70 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 C11orf98E9PRG8 122 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 LAMTOR5O43504 91 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 OR1I1O60431 355 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 RNGTTO60942 597 aaKnown RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 SNX4O95219 450 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 CREB1P16220 341 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 FCHO2Q0JRZ9 810 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 AAGABQ6PD74 315 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 FAM92BQ6ZTR7 304 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 DCAKDQ8WVC6 231 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 C17orf62Q9BQA9 187 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 ST6GALNAC4Q9H4F1 302 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 EIF2B3Q9NR50 452 aaKnown RBP10.89□□□□□ -0.67
LINC00346-201ENST00000538077 HRASLS2Q9NWW9 162 aa10.89□□□□□ -0.67
LINC00346-201ENST00000538077 PCDHB3Q9Y5E6 796 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms