RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 GPR153Q6NV75 609 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 KLHL17Q6TDP4 642 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 SVOPLQ8N434 492 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 GGHQ92820 318 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 PTP4A1Q93096 173 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 NCLNQ969V3 563 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 ZBED6CLQ96FA7 236 aaPredicted RBP10.38□□□□□ -0.75
RTN3-208ENST00000537981 CCM2Q9BSQ5 444 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 BCL2L14Q9BZR8 327 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 RACGAP1Q9H0H5 632 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 ESRP2Q9H6T0 727 aaKnown RBP10.38□□□□□ -0.75
RTN3-208ENST00000537981 ZFP64Q9NPA5 681 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 SEMA4BQ9NPR2 832 aaPredicted RBP10.38□□□□□ -0.75
RTN3-208ENST00000537981 SLC6A13Q9NSD5 602 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 RDH8Q9NYR8 311 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 TRHDEQ9UKU6 1024 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 NDRG4Q9ULP0 352 aaKnown RBP10.38□□□□□ -0.75
RTN3-208ENST00000537981 CACNG2Q9Y698 323 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 HNRNPCL2B2RXH8 293 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 FAM72CH0Y354 149 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 LRRTM2O43300 516 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 MED7O43513 233 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 AKAP8O43823 692 aaKnown RBP10.38□□□□□ -0.75
RTN3-208ENST00000537981 FZD6O60353 706 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 SLC22A3O75751 556 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 DKK1O94907 266 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 WDR47O94967 919 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 B3GALT4O96024 378 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 MT-CYBP00156 380 aaPredicted RBP10.38□□□□□ -0.75
RTN3-208ENST00000537981 PCSK2P16519 638 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 TIE1P35590 1138 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 MAN2A2P49641 1150 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 PURAQ00577 322 aaKnown RBP10.38□□□□□ -0.75
RTN3-208ENST00000537981 SCN1BQ07699 218 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 DSC1Q08554 894 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 PCID2Q5JVF3 399 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 PDZK1Q5T2W1 519 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 FAM72AQ5TYM5 149 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 FAM72DQ6L9T8 149 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 ATCAYQ86WG3 371 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 FAM72BQ86X60 149 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 GPALPP1Q8IXQ4 340 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 GMCL1P1Q8NEA9 526 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 NETO1Q8TDF5 533 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 ATOH1Q92858 354 aaPredicted RBP10.38□□□□□ -0.75
RTN3-208ENST00000537981 FAM162AQ96A26 154 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 ESAMQ96AP7 390 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 QRFPRQ96P65 431 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 TAAR1Q96RJ0 339 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 SARGQ9BW04 601 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 EXOSC4Q9NPD3 245 aaKnown RBP10.38□□□□□ -0.75
RTN3-208ENST00000537981 ANKEF1Q9NU02 776 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 FAM198AQ9UFP1 575 aa10.38□□□□□ -0.75
RTN3-208ENST00000537981 ZNF490Q9ULM2 529 aaPredicted RBP10.38□□□□□ -0.75
RTN3-208ENST00000537981 EFCAB10A6NFE3 127 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 MYL12BO14950 172 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 GSTA4O15217 222 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 RFPL3O75679 317 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 SERPINA1P01009 418 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 RAF1P04049 648 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 MYL12AP19105 171 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 CYP2B6P20813 491 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 CD9P21926 228 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 SOX6P35712 828 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 NNMTP40261 264 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 KPNA2P52292 529 aaKnown RBP10.37□□□□□ -0.75
RTN3-208ENST00000537981 AGFG1P52594 562 aaKnown RBP10.37□□□□□ -0.75
RTN3-208ENST00000537981 CDKN2DP55273 166 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 HUNKP57058 714 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 RRAS2P62070 204 aaPredicted RBP10.37□□□□□ -0.75
RTN3-208ENST00000537981 PSPHP78330 225 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 RPP38P78345 283 aaKnown RBP10.37□□□□□ -0.75
RTN3-208ENST00000537981 GRK1Q15835 563 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 PFKFB4Q16877 469 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 GLYR1Q49A26 553 aaPredicted RBP10.37□□□□□ -0.75
RTN3-208ENST00000537981 MPPE1Q53F39 396 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 CACHD1Q5VU97 1274 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 FAM171A1Q5VUB5 890 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 TIGD3Q6B0B8 471 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 RETSATQ6NUM9 610 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 LRRC8DQ7L1W4 858 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 ADGRG3Q86Y34 549 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 PTGR2Q8N8N7 351 aaPredicted RBP10.37□□□□□ -0.75
RTN3-208ENST00000537981 ZNF548Q8NEK5 533 aaPredicted RBP10.37□□□□□ -0.75
RTN3-208ENST00000537981 OR2T12Q8NG77 320 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 ZNF431Q8TF32 576 aaPredicted RBP10.37□□□□□ -0.75
RTN3-208ENST00000537981 PHF21AQ96BD5 680 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 MTFMTQ96DP5 389 aaKnown RBP10.37□□□□□ -0.75
RTN3-208ENST00000537981 SGTBQ96EQ0 304 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 ZNF419Q96HQ0 510 aaPredicted RBP10.37□□□□□ -0.75
RTN3-208ENST00000537981 KCNC2Q96PR1 638 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 ZNF416Q9BWM5 594 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 SHARPINQ9H0F6 387 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 RERGLQ9H628 205 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 AIG1Q9NVV5 245 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 LEF1Q9UJU2 399 aaPredicted RBP10.37□□□□□ -0.75
RTN3-208ENST00000537981 ORC6Q9Y5N6 252 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 UBIAD1Q9Y5Z9 338 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 OR1I1O60431 355 aa10.37□□□□□ -0.75
RTN3-208ENST00000537981 CBX7O95931 251 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms