RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 CTPS1P17812 591 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 GPX2P18283 190 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 SDC1P18827 310 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 LIPAP38571 399 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 GDF5P43026 501 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 GATMP50440 423 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 DEFA1P59665 94 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 DEFA3P59666 94 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 VLDLRP98155 873 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 CREMQ03060 361 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 VEZF1Q14119 521 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 LAPTM4AQ15012 233 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 TIGD6Q17RP2 521 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 RTP2Q5QGT7 225 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 GPRC6AQ5T6X5 926 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 RSPO2Q6UXX9 243 aaPredicted RBP11.79□□□□□ -0.52
CPSF7-218ENST00000537641 MACC1Q6ZN28 852 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 NPAS4Q8IUM7 802 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 SELENOMQ8WWX9 145 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 HTRA1Q92743 480 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 ERLEC1Q96DZ1 483 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 ZNF486Q96H40 463 aaPredicted RBP11.79□□□□□ -0.52
CPSF7-218ENST00000537641 MAGEB10Q96LZ2 347 aaPredicted RBP11.79□□□□□ -0.52
CPSF7-218ENST00000537641 SLC32A1Q9H598 525 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 CWH43Q9H720 699 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 LATS2Q9NRM7 1088 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 KLHL42Q9P2K6 505 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 LHX3Q9UBR4 397 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 DNMT3LQ9UJW3 386 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 PNMA8BQ9ULN7 279 aaPredicted RBP11.79□□□□□ -0.52
CPSF7-218ENST00000537641 PCDHGA6Q9Y5G7 932 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 PCDHGA3Q9Y5H0 932 aa11.79□□□□□ -0.52
CPSF7-218ENST00000537641 TET1Q8NFU7 2136 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 KCNE1BA0A087WTH5 132 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 PNMA8CA0A1B0GUJ8 204 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 SLC38A8A6NNN8 435 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 CLIC1O00299 241 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 EIF3FO00303 357 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-218ENST00000537641 GPR39O43194 453 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 KCNK5O95279 499 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 PRAMEF1O95521 474 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 ITGB6P18564 788 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 GADD45AP24522 165 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 PTX3P26022 381 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-218ENST00000537641 GGT2P36268 569 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 GGT5P36269 586 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 ATP5C1P36542 298 aaKnown RBP11.78□□□□□ -0.52
CPSF7-218ENST00000537641 TGFBR1P36897 503 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 KIR3DL1P43629 444 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 ARF5P84085 180 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 SRSF11Q05519 484 aaKnown RBP11.78□□□□□ -0.52
CPSF7-218ENST00000537641 FPGSQ05932 587 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 DUSP4Q13115 394 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 SLC14A1Q13336 389 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 GPNMBQ14956 572 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 ZCCHC8Q6NZY4 707 aaKnown RBP11.78□□□□□ -0.52
CPSF7-218ENST00000537641 NEK5Q6P3R8 708 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 ZNF783Q6ZMS7 281 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 PRR23CQ6ZRP0 262 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 ANKRD46Q86W74 232 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 MMAAQ8IVH4 418 aaKnown RBP11.78□□□□□ -0.52
CPSF7-218ENST00000537641 OR10Q1Q8NGQ4 319 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 C9orf43Q8TAL5 461 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-218ENST00000537641 CSGALNACT1Q8TDX6 532 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 PLD4Q96BZ4 506 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 MYO19Q96H55 970 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 TSSK3Q96PN8 268 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 RAD9AQ99638 391 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 TTPALQ9BTX7 342 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 C6orf62Q9GZU0 229 aaPredicted RBP11.78□□□□□ -0.52
CPSF7-218ENST00000537641 SPATA7Q9P0W8 599 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 HTTP42858 3142 aa11.78□□□□□ -0.52
CPSF7-218ENST00000537641 LOC110117498-PIK3R3F6TDL0 507 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 CBX4O00257 560 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 PITPNM1O00562 1244 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 GAPDHSO14556 408 aaPredicted RBP11.77□□□□□ -0.52
CPSF7-218ENST00000537641 FPGTO14772 594 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 DSCR3O14972 297 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 GALTP07902 379 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 PRPS1L1P21108 318 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 ACRV1P26436 265 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 C21orf58P58505 322 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 RPS24P62847 133 aaKnown RBP11.77□□□□□ -0.52
CPSF7-218ENST00000537641 OLR1P78380 273 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 SYT16Q17RD7 645 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 ARMC12Q5T9G4 340 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 FAM151BQ6UXP7 276 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 ZSWIM9Q86XI8 627 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 PTOV1Q86YD1 416 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 SYNPOQ8N3V7 929 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 DNAJC22Q8N4W6 341 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 SLAIN1Q8ND83 568 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 CHTF18Q8WVB6 975 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 ATL1Q8WXF7 558 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 PIK3R3Q92569 461 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 CRELD1Q96HD1 420 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 COL21A1Q96P44 957 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 HTATIP2Q9BUP3 242 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 BOCQ9BWV1 1114 aa11.77□□□□□ -0.52
CPSF7-218ENST00000537641 ELOVL6Q9H5J4 265 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms