RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 TMED5Q9Y3A6 229 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 PCDHB3Q9Y5E6 796 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 SAP18O00422 153 aaKnown RBP16.86■□□□□ 0.29
SNX17-210ENST00000537606 EI24O14681 340 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 SCAMP1O15126 338 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 PABPC4LP0CB38 370 aaKnown RBP16.86■□□□□ 0.29
SNX17-210ENST00000537606 MAPK9P45984 424 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 CSTF3Q12996 717 aaKnown RBP16.86■□□□□ 0.29
SNX17-210ENST00000537606 ENPP2Q13822 863 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 FXNQ16595 210 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 AASDHQ4L235 1098 aaPredicted RBP16.86■□□□□ 0.29
SNX17-210ENST00000537606 RUNDC3AQ59EK9 446 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 OR2T12Q8NG77 320 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 MYOCQ99972 504 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 MUC13Q9H3R2 512 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 DPEP2Q9H4A9 486 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 SOX17Q9H6I2 414 aaPredicted RBP16.86■□□□□ 0.29
SNX17-210ENST00000537606 CAAP1Q9H8G2 361 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 FBXL12Q9NXK8 326 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 INVSQ9Y283 1065 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 PCDHGA11Q9Y5H2 935 aa16.86■□□□□ 0.29
SNX17-210ENST00000537606 DENND4AQ7Z401 1863 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 GBAP04062 536 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 FUCA1P04066 466 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 C5AR1P21730 350 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 MAT2AP31153 395 aaKnown RBP16.85■□□□□ 0.29
SNX17-210ENST00000537606 SLBPQ14493 270 aaKnown RBP eCLIP16.85■□□□□ 0.29
SNX17-210ENST00000537606 IRF4Q15306 451 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 ATP6AP1Q15904 470 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 NADK2Q4G0N4 442 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 PRR23BQ6ZRT6 265 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 CHST15Q7LFX5 561 aaPredicted RBP16.85■□□□□ 0.29
SNX17-210ENST00000537606 GPR180Q86V85 440 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 PROSER1Q86XN7 944 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 FAM47BQ8NA70 645 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 GOLM1Q8NBJ4 401 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 ZNF740Q8NDX6 193 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 OR14C36Q8NHC7 312 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 TFGQ92734 400 aaPredicted RBP16.85■□□□□ 0.29
SNX17-210ENST00000537606 TFAP2CQ92754 450 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 VPS50Q96JG6 964 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 MAGEB10Q96LZ2 347 aaPredicted RBP16.85■□□□□ 0.29
SNX17-210ENST00000537606 GSTT1P30711 240 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 PNLIPRP1P54315 467 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 UGT8Q16880 541 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 KRT80Q6KB66 452 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 DUS1LQ6P1R4 473 aaKnown RBP16.85■□□□□ 0.29
SNX17-210ENST00000537606 TBPL2Q6SJ96 375 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 LRRTM4Q86VH4 590 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 KLHDC8AQ8IYD2 350 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 LRRC56Q8IYG6 542 aaPredicted RBP16.85■□□□□ 0.29
SNX17-210ENST00000537606 FBXO15Q8NCQ5 510 aaPredicted RBP16.85■□□□□ 0.29
SNX17-210ENST00000537606 CSGALNACT1Q8TDX6 532 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 REXO4Q9GZR2 422 aaKnown RBP16.85■□□□□ 0.29
SNX17-210ENST00000537606 FZD3Q9NPG1 666 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 OLAHQ9NV23 265 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 UTS2RQ9UKP6 389 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 BTBD3Q9Y2F9 522 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 DYRK1BQ9Y463 629 aa16.85■□□□□ 0.29
SNX17-210ENST00000537606 PCM1Q15154 2024 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 SERTM1A2A2V5 107 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 GSTA4O15217 222 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 TGFB1P01137 390 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 RAE1P78406 368 aaKnown RBP16.84■□□□□ 0.29
SNX17-210ENST00000537606 TMEM196Q5HYL7 178 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 INTS11Q5TA45 600 aaKnown RBP16.84■□□□□ 0.29
SNX17-210ENST00000537606 MED27Q6P2C8 311 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 FBXO30Q8TB52 745 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 KCNH6Q9H252 994 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 MAGEL2Q9UJ55 1249 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 TRBV5-3A0A0A0MS03 114 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 NPIPB8E9PQR5 432 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 YY2O15391 372 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 ADH1BP00325 375 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 COX7A2P14406 83 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 GGT1P19440 569 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 KIR3DL1P43629 444 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 RPL5P46777 297 aaKnown RBP16.84■□□□□ 0.29
SNX17-210ENST00000537606 HKDC1Q2TB90 917 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 IER5LQ5T953 404 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 TMEM214Q6NUQ4 689 aaKnown RBP16.84■□□□□ 0.29
SNX17-210ENST00000537606 ENPP6Q6UWR7 440 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 GALNT13Q8IUC8 556 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 HOMEZQ8IX15 550 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 TBC1D21Q8IYX1 336 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 PAPD5Q8NDF8 572 aaKnown RBP16.84■□□□□ 0.29
SNX17-210ENST00000537606 ZNF548Q8NEK5 533 aaPredicted RBP16.84■□□□□ 0.29
SNX17-210ENST00000537606 TESCQ96BS2 214 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 FBXL20Q96IG2 436 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 ITCHQ96J02 903 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 SGPP1Q9BX95 441 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 WDR26Q9H7D7 661 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 CCDC177Q9NQR7 707 aaPredicted RBP16.84■□□□□ 0.29
SNX17-210ENST00000537606 ERVK-11Q9UQG0 969 aa16.84■□□□□ 0.29
SNX17-210ENST00000537606 MAGED1Q9Y5V3 778 aaPredicted RBP16.84■□□□□ 0.29
SNX17-210ENST00000537606 RFXANKO14593 260 aa16.83■□□□□ 0.28
SNX17-210ENST00000537606 SEC24DO94855 1032 aaPredicted RBP16.83■□□□□ 0.28
SNX17-210ENST00000537606 LDLRP01130 860 aa16.83■□□□□ 0.28
SNX17-210ENST00000537606 ANXA6P08133 673 aa16.83■□□□□ 0.28
SNX17-210ENST00000537606 MYCLP1P12525 358 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms