RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ZXDBP98169 803 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 CYP4F8P98187 520 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 PRKCDQ05655 676 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 FAPQ12884 760 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 EFR3AQ14156 821 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 LAPTM4AQ15012 233 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 ZMYND11Q15326 602 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 TECRLQ5HYJ1 363 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 PAGE3Q5JUK9 113 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 ATXN7L2Q5T6C5 722 aaPredicted RBP13.58□□□□□ -0.24
LIG1-203ENST00000536218 PAMR1Q6UXH9 720 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 OTOP2Q7RTS6 562 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 ANKRD33Q7Z3H0 272 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 TMEM199Q8N511 208 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 MDGA1Q8NFP4 955 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 TADA1Q96BN2 335 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 GDF15Q99988 308 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 MGME1Q9BQP7 344 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 ZNF224Q9NZL3 707 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 UTS2RQ9UKP6 389 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 BTRCQ9Y297 605 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 NAALAD2Q9Y3Q0 740 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 RAI2Q9Y5P3 530 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 OAS3Q9Y6K5 1087 aaKnown RBP13.58□□□□□ -0.24
LIG1-203ENST00000536218 PNMA8CA0A1B0GUJ8 204 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 SMLR1H3BR10 107 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 K7ERQ8 282 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 GPR39O43194 453 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 OR2B3O76000 313 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 HGFP14210 728 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 DDCP20711 480 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 ITGB8P26012 769 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 HNF4AP41235 474 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 KPNA2P52292 529 aaKnown RBP13.58□□□□□ -0.24
LIG1-203ENST00000536218 CNKSR3Q6P9H4 555 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 OR4M1Q8NGD0 313 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 PLD4Q96BZ4 506 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 VWCEQ96DN2 955 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 KLF16Q9BXK1 252 aaPredicted RBP13.58□□□□□ -0.24
LIG1-203ENST00000536218 PCDHB14Q9Y5E9 798 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 TANC1Q9C0D5 1861 aa13.58□□□□□ -0.24
LIG1-203ENST00000536218 OR5K3A6NET4 321 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 BNIP3LO60238 219 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 PGRP06401 933 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 RAP2AP10114 183 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 KCNK10P57789 538 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 ARF5P84085 180 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 RHAGQ02094 409 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 MADCAM1Q13477 382 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 ZNF691Q5VV52 312 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 TPGS1Q6ZTW0 290 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 PHC2Q8IXK0 858 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 KIAA1958Q8N8K9 716 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 ZNF557Q8N988 423 aaPredicted RBP13.57□□□□□ -0.24
LIG1-203ENST00000536218 ZFAND1Q8TCF1 268 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 UQCC2Q9BRT2 126 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 ATP6V1HQ9UI12 483 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 MKLN1Q9UL63 735 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 FNDC1Q4ZHG4 1894 aaPredicted RBP13.57□□□□□ -0.24
LIG1-203ENST00000536218 LRRC14BA6NHZ5 514 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 UBFD1O14562 309 aaKnown RBP13.57□□□□□ -0.24
LIG1-203ENST00000536218 DSCR3O14972 297 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 IPO13O94829 963 aaKnown RBP13.57□□□□□ -0.24
LIG1-203ENST00000536218 ITGA2P17301 1181 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 CTPS1P17812 591 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 SOX9P48436 509 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 EPHB3P54753 998 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 DIO3P55073 304 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 CXorf57Q6NSI4 855 aaKnown RBP13.57□□□□□ -0.24
LIG1-203ENST00000536218 CYHR1Q6ZMK1 362 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 VN1R5Q7Z5H4 357 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 RIMKLAQ8IXN7 391 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 SLC39A11Q8N1S5 342 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 YIPF7Q8N8F6 280 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 WFDC5Q8TCV5 224 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 PCNPQ8WW12 178 aaKnown RBP13.57□□□□□ -0.24
LIG1-203ENST00000536218 ZNF599Q96NL3 588 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 APOL4Q9BPW4 351 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 RBM4BQ9BQ04 359 aaKnown RBP13.57□□□□□ -0.24
LIG1-203ENST00000536218 CHCHD6Q9BRQ6 235 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 RBM4Q9BWF3 364 aaKnown RBP13.57□□□□□ -0.24
LIG1-203ENST00000536218 TRIM54Q9BYV2 358 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 EVA1BQ9NVM1 165 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 FBXO10Q9UK96 956 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 SNX7Q9UNH6 387 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 RNF6Q9Y252 685 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 MICAL3Q7RTP6 2002 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 CIB4A0PJX0 185 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 SIX3O95343 332 aaPredicted RBP13.57□□□□□ -0.24
LIG1-203ENST00000536218 CKMP06732 381 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 LINC00032P0C843 101 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 CDH18Q13634 790 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 ENPP6Q6UWR7 440 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 TMEM150AQ86TG1 271 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 PTERQ96BW5 349 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 PPM1MQ96MI6 270 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 TRIB3Q96RU7 358 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.57□□□□□ -0.24
LIG1-203ENST00000536218 LIMD1Q9UGP4 676 aa13.57□□□□□ -0.24
LIG1-203ENST00000536218 PCDHB9Q9Y5E1 797 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms