RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 PARP9Q8IXQ6 854 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 DNAJB14Q8TBM8 379 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 ZNF480Q8WV37 535 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 ASB11Q8WXH4 323 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 YIPF2Q9BWQ6 316 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 DRC3Q9H069 523 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 PCBD2Q9H0N5 130 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 MKKSQ9NPJ1 570 aaPredicted RBP12.5□□□□□ -0.41
RTN3-207ENST00000536011 FBXO6Q9NRD1 293 aaPredicted RBP12.5□□□□□ -0.41
RTN3-207ENST00000536011 TRPC4Q9UBN4 977 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 NOVA2Q9UNW9 492 aaKnown RBP12.5□□□□□ -0.41
RTN3-207ENST00000536011 DHRS7Q9Y394 339 aa12.5□□□□□ -0.41
RTN3-207ENST00000536011 TEX15Q9BXT5 2789 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 HIVEP3Q5T1R4 2406 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 ICE1Q9Y2F5 2266 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 ZCWPW2A0A1B0GU75 182 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 PABPN1LA6NDY0 278 aaKnown RBP12.49□□□□□ -0.41
RTN3-207ENST00000536011 E7ENX8 843 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 GFYI3L273 518 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 MASP2O00187 686 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 KIF5CO60282 957 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 NRP2O60462 931 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 ALOX12BO75342 701 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 HEXBP07686 556 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 SKIV2L2P42285 1042 aaKnown RBP12.49□□□□□ -0.41
RTN3-207ENST00000536011 MAGEA3P43357 314 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 RGS4P49798 205 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 EMP2P54851 167 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 TAP2Q03519 686 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 CDC16Q13042 620 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 MFAP5Q13361 173 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 CTBP1Q13363 440 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 CUL1Q13616 776 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 ZNF169Q14929 603 aaPredicted RBP12.49□□□□□ -0.41
RTN3-207ENST00000536011 HIF1AQ16665 826 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 CRB2Q5IJ48 1285 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 ZNF425Q6IV72 752 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 FBXO42Q6P3S6 717 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 NDUFAF7Q7L592 441 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 DENND6AQ8IWF6 608 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 PALM2Q8IXS6 379 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 PPIL6Q8IXY8 311 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 PRSS58Q8IYP2 241 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.49□□□□□ -0.413e-7■■■□□ 19.1
RTN3-207ENST00000536011 MMABQ96EY8 250 aaPredicted RBP12.49□□□□□ -0.41
RTN3-207ENST00000536011 CNDP1Q96KN2 507 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 C5orf34Q96MH7 638 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 LMF1Q96S06 567 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 BARD1Q99728 777 aaKnown RBP12.49□□□□□ -0.41
RTN3-207ENST00000536011 TGIF2Q9GZN2 237 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 ZBTB20Q9HC78 741 aaPredicted RBP12.49□□□□□ -0.41
RTN3-207ENST00000536011 ZNF160Q9HCG1 818 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 CCDC177Q9NQR7 707 aaPredicted RBP12.49□□□□□ -0.41
RTN3-207ENST00000536011 RIC8BQ9NVN3 520 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 GALPQ9UBC7 116 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 PCYOX1Q9UHG3 505 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 TRMT6Q9UJA5 497 aaKnown RBP12.49□□□□□ -0.41
RTN3-207ENST00000536011 RUVBL1Q9Y265 456 aaKnown RBP12.49□□□□□ -0.41
RTN3-207ENST00000536011 SLC5A6Q9Y289 635 aa12.49□□□□□ -0.41
RTN3-207ENST00000536011 IGKV1-8A0A0C4DH67 115 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 A0A1W2PQ72 361 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 DYTNA2CJ06 578 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 IDSB3KWA1 339 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 TTC4O95801 387 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 CYC1P08574 325 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 PGAM1P18669 254 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 SLC26A3P40879 764 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 AVPR1BP47901 424 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 FAM53BQ14153 422 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 PPP1R7Q15435 360 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 HKDC1Q2TB90 917 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 ATG9BQ674R7 924 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 RIPOR1Q6ZS17 1223 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 UBE2R2Q712K3 238 aaPredicted RBP12.48□□□□□ -0.41
RTN3-207ENST00000536011 KCNMB4Q86W47 210 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 TMEM151BQ8IW70 566 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 ST6GALNAC3Q8NDV1 305 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 GIMAP7Q8NHV1 300 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 CD200R1Q8TD46 325 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 MCOLN3Q8TDD5 553 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 ACTRT1Q8TDG2 376 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 MS4A14Q96JA4 679 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 OR2A5Q96R48 311 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 GPR21Q99679 349 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 TRIM56Q9BRZ2 755 aaKnown RBP12.48□□□□□ -0.41
RTN3-207ENST00000536011 NAT9Q9BTE0 207 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 FAM129AQ9BZQ8 928 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 ABCF3Q9NUQ8 709 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 TAS2R13Q9NYV9 303 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 FBXO5Q9UKT4 447 aa12.48□□□□□ -0.41
RTN3-207ENST00000536011 CES2O00748 559 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 MED26O95402 600 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 SERPINA7P05543 415 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 C8GP07360 202 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 COX6A1P12074 109 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 ICAM2P13598 275 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 CCND1P24385 295 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 GRK3P35626 688 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 PER3P56645 1201 aa12.47□□□□□ -0.41
RTN3-207ENST00000536011 RPS15AP62244 130 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms