RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 GDPD4Q6W3E5 623 aa15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 GPR155Q7Z3F1 870 aa15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 HS6ST3Q8IZP7 471 aa15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 CPA6Q8N4T0 437 aa15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 SNRNP27Q8WVK2 155 aaKnown RBP15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 ATL1Q8WXF7 558 aa15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 CLP1Q92989 425 aaKnown RBP15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 SPATA9Q9BWV2 254 aa15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 PDP1Q9P0J1 537 aaPredicted RBP15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 NDRG4Q9ULP0 352 aaKnown RBP15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 PCDHB11Q9Y5F2 797 aa15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 GMPPBQ9Y5P6 360 aa15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 CORINQ9Y5Q5 1042 aa15.52■□□□□ 0.07
CHMP1A-202ENST00000535997 H0YIV9 168 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 MRPS14O60783 128 aaKnown RBP15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 XYLBO75191 536 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 MYO1DO94832 1006 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 FKBP9O95302 570 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 HSD3B1P14060 373 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 CD22P20273 847 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 HSD3B2P26439 372 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 HNF4AP41235 474 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 MLLT10P55197 1068 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 VLDLRP98155 873 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 ACSM2AQ08AH3 577 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 NR1D2Q14995 579 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 ACSM2BQ68CK6 577 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 BRAT1Q6PJG6 821 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 B3GNT8Q7Z7M8 397 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 THOC6Q86W42 341 aaKnown RBP15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 HORMAD1Q86X24 394 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 TMC8Q8IU68 726 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 GPR65Q8IYL9 337 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 RNF175Q8N4F7 328 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 TTC29Q8NA56 475 aaPredicted RBP15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 TPT1P8Q9HAU6 139 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 BRF2Q9HAW0 419 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 MAPRE3Q9UPY8 281 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 ERGIC3Q9Y282 383 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 AP1M2Q9Y6Q5 423 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 J3QRK9 145 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 hCG_2039718K7EN88 272 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 SGTAO43765 313 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 SULT1C4O75897 302 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 GABARAPO95166 117 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 CPSF4O95639 269 aaKnown RBP15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 GSTM1P09488 218 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 OCM2P0CE71 109 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 OCMP0CE72 109 aaPredicted RBP15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 LAG3P18627 525 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 CD6P30203 668 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 OCA2Q04671 838 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 PCDH1Q08174 1060 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 LAPTM4AQ15012 233 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 CNKSR3Q6P9H4 555 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 VTCN1Q7Z7D3 282 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 VPS37AQ8NEZ2 397 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 TIFAQ96CG3 184 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 SH3YL1Q96HL8 342 aaPredicted RBP15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 MTERF1Q99551 399 aaKnown RBP15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 BBS2Q9BXC9 721 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 SLC46A2Q9BY10 475 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 NECTIN3Q9NQS3 549 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 ERVK-18Q9QC07 812 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 SAMHD1Q9Y3Z3 626 aaKnown RBP15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 PCDHGA10Q9Y5H3 936 aa15.51■□□□□ 0.07
CHMP1A-202ENST00000535997 CARNS1A5YM72 827 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 KRT87PA6NCN2 255 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 WASH3PC4AMC7 463 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 QSOX1O00391 747 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 SLC22A1O15245 554 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 TGM5O43548 720 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 LILRB3O75022 631 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 MTX2O75431 263 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 PSIP1O75475 530 aaKnown RBP15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 C1QCP02747 245 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 LRG1P02750 347 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 CYP2A6P11509 494 aaPredicted RBP15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 ASMTP46597 345 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 DCDC1P59894 354 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 PHEXP78562 749 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 IL1RL1Q01638 556 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 DOC2AQ14183 400 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 LRRC73Q5JTD7 316 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 SYT6Q5T7P8 510 aaPredicted RBP15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 ANKRD33Q7Z3H0 272 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 CENPSQ8N2Z9 138 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 SYNPOQ8N3V7 929 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 CHST14Q8NCH0 376 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 SCAMP4Q969E2 229 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 VMP1Q96GC9 406 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 HSH2DQ96JZ2 352 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 FAM83CQ9BQN1 747 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 DUSP26Q9BV47 211 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 REEP1Q9H902 201 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 CCNB1IP1Q9NPC3 277 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 CREBZFQ9NS37 354 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 BTNL2Q9UIR0 455 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 CORO2BQ9UQ03 480 aa15.5■□□□□ 0.07
CHMP1A-202ENST00000535997 MYOFQ9NZM1 2061 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms