RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 STK32CQ86UX6 486 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 YIPF6Q96EC8 236 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 RDH12Q96NR8 316 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 SLC22A12Q96S37 553 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 APOL5Q9BWW9 433 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 ZDHHC3Q9NYG2 299 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 PPIL1Q9Y3C6 166 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 NAALAD2Q9Y3Q0 740 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 SMAD6O43541 496 aaKnown RBP17.42■□□□□ 0.38
RAB40C-203ENST00000535977 STK16O75716 305 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 BMP1P13497 986 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 ITGB6P18564 788 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 RPL38P63173 70 aaKnown RBP17.42■□□□□ 0.38
RAB40C-203ENST00000535977 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.42■□□□□ 0.38
RAB40C-203ENST00000535977 TPRG1Q6ZUI0 275 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 RBM23Q86U06 439 aaKnown RBP17.42■□□□□ 0.38
RAB40C-203ENST00000535977 DTWD1Q8N5C7 304 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 OR2AP1Q8NGE2 309 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 LKAAEAR1Q8TD35 194 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 MRPS31Q92665 395 aaKnown RBP17.42■□□□□ 0.38
RAB40C-203ENST00000535977 USP7Q93009 1102 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 ZNF717Q9BY31 904 aaPredicted RBP17.42■□□□□ 0.38
RAB40C-203ENST00000535977 ZNF106Q9H2Y7 1883 aaKnown RBP17.42■□□□□ 0.38
RAB40C-203ENST00000535977 IL21Q9HBE4 155 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 LRTM1Q9HBL6 345 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 PLXNA4Q9HCM2 1894 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 FAM118AQ9NWS6 357 aa17.42■□□□□ 0.38
RAB40C-203ENST00000535977 SLC1A7O00341 560 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 MANBAO00462 879 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 GSTA4O15217 222 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 SSX4O60224 188 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 MAP2K4P45985 399 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 CCL23P55773 120 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 TJAP1Q5JTD0 557 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 ZNF544Q6NX49 715 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 GLRX5Q86SX6 157 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 DDX53Q86TM3 631 aaKnown RBP17.41■□□□□ 0.38
RAB40C-203ENST00000535977 CLDN19Q8N6F1 224 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 RORBQ92753 470 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 GTF2H4Q92759 462 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 ZNF583Q96ND8 569 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 TTYH2Q9BSA4 534 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.41■□□□□ 0.38
RAB40C-203ENST00000535977 EXD2Q9NVH0 621 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 FKBP14Q9NWM8 211 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 C1orf109Q9NX04 203 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 WBP1LQ9NX94 342 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 ZNF490Q9ULM2 529 aaPredicted RBP17.41■□□□□ 0.38
RAB40C-203ENST00000535977 PCM1Q15154 2024 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 UPK1AO00322 258 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 ZW10O43264 779 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 M6PRP20645 277 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 GGT5P36269 586 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 PIGAP37287 484 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 HTR3AP46098 478 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 DGKQP52824 942 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 OR2B6P58173 313 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 SLC7A9P82251 487 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 CREMQ03060 361 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 DUSP7Q16829 419 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 TXNDC8Q6A555 127 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 NLGN4XQ8N0W4 816 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 OR2T12Q8NG77 320 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 OR6K2Q8NGY2 324 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 RPL3LQ92901 407 aaKnown RBP17.41■□□□□ 0.38
RAB40C-203ENST00000535977 TMBIM1Q969X1 311 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 SCRN2Q96FV2 425 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 SLC7A5P2Q9GIP4 190 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 SLC32A1Q9H598 525 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 ZNF334Q9HCZ1 680 aaPredicted RBP17.41■□□□□ 0.38
RAB40C-203ENST00000535977 SCELO95171 688 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 CLDN9O95484 217 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 HPRP00739 348 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 RRM2P31350 389 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 MTPNP58546 118 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 EPS8Q12929 822 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 TTC23Q5W5X9 447 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 CNKSR3Q6P9H4 555 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 USP45Q70EL2 814 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 PRSS48Q7RTY5 328 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 DEFB128Q7Z7B8 93 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 ASIC4Q96FT7 647 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 MAGEB10Q96LZ2 347 aaPredicted RBP17.41■□□□□ 0.38
RAB40C-203ENST00000535977 MBOAT4Q96T53 435 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 CLMPQ9H6B4 373 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 SLA2Q9H6Q3 261 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 SPG21Q9NZD8 308 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 TSR3Q9UJK0 312 aaKnown RBP17.41■□□□□ 0.38
RAB40C-203ENST00000535977 OSGIN1Q9UJX0 560 aa17.41■□□□□ 0.38
RAB40C-203ENST00000535977 MN1Q10571 1320 aaPredicted RBP17.4■□□□□ 0.38
RAB40C-203ENST00000535977 PABPN1LA6NDY0 278 aaKnown RBP17.4■□□□□ 0.38
RAB40C-203ENST00000535977 SEC22BO75396 215 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 PFKLP17858 780 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 LMAN2Q12907 356 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 DGCR6Q14129 220 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 PLEKHG6Q3KR16 790 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 Q5BKY6 102 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 PLD3Q8IV08 490 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 ST6GAL2Q96JF0 529 aa17.4■□□□□ 0.38
RAB40C-203ENST00000535977 COPS8Q99627 209 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms