RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 BFARQ9NZS9 450 aa10.65□□□□□ -0.7
CLSTN3-206ENST00000535668 ZC3H7BQ9UGR2 993 aaKnown RBP10.65□□□□□ -0.7
CLSTN3-206ENST00000535668 ZNF835Q9Y2P0 537 aa10.65□□□□□ -0.7
CLSTN3-206ENST00000535668 NF1P21359 2839 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 A0A0J9YVX5 310 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 ASPDHA6ND91 283 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 ARHGEF33A8MVX0 844 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 E7EVH7 732 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 PFDN6O15212 129 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 NDUFS3O75489 264 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 CCNDBP1O95273 360 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 NSA2O95478 260 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 POU3F2P20265 443 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 FBLP22087 321 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 IL10P22301 178 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 CXCR2P25025 360 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 RPL22P35268 128 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 CLCN7P51798 805 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 ARG2P78540 354 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 KRTCAP3Q53RY4 240 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 ICE2Q659A1 982 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 PLAG1Q6DJT9 500 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 XKRXQ6PP77 449 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 SDCCAG8Q86SQ7 713 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 ZC3H7AQ8IWR0 971 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 KRT222Q8N1A0 295 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 ARMC10Q8N2F6 343 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 ACRBPQ8NEB7 543 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 GSDMBQ8TAX9 411 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 BRIX1Q8TDN6 353 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 ASB11Q8WXH4 323 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 ATG4AQ8WYN0 398 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 MOCOSQ96EN8 888 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 MIPEPQ99797 713 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 EBNA1BP2Q99848 306 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 BAG1Q99933 345 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 TREX2Q9BQ50 279 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 DRC3Q9H069 523 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 INTS10Q9NVR2 710 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 COPG2Q9UBF2 871 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 SOX13Q9UN79 622 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 PACSIN2Q9UNF0 486 aaPredicted RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 ZNF148Q9UQR1 794 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 RUVBL1Q9Y265 456 aaKnown RBP10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 MED16Q9Y2X0 877 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 CAPN6Q9Y6Q1 641 aa10.64□□□□□ -0.71
CLSTN3-206ENST00000535668 GTF3C1Q12789 2109 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 MAGEB16A2A368 324 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 OR5H15A6NDH6 313 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 KIF5CO60282 957 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 NRP2O60462 931 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 ALOX12BO75342 701 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 WDPCPO95876 746 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 FTCDO95954 541 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 IFNB1P01574 187 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 PTMAP06454 111 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 MLNP12872 115 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 ENO3P13929 434 aaPredicted RBP10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 PSMB5P28074 263 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 EFNA3P52797 238 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 YBX1P67809 324 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 PTK6Q13882 451 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 FASTKQ14296 549 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 CNSTQ6PJW8 725 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 LINC00696Q6ZRV3 163 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 SHISA6Q6ZSJ9 500 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 LDB1Q86U70 411 aaPredicted RBP10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 CILP2Q8IUL8 1156 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 LMNTD2Q8IXW0 634 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 DTWD1Q8N5C7 304 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 CSNK1A1LQ8N752 337 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 CFAP61Q8NHU2 1237 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 ZNF480Q8WV37 535 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 KCNJ9Q92806 393 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 TM4SF19Q96DZ7 209 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 TRIM45Q9H8W5 580 aaPredicted RBP10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 MRPS30Q9NP92 439 aaKnown RBP10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 HOMER3Q9NSC5 361 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 TEKT2Q9UIF3 430 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 COMMD10Q9Y6G5 202 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 MAU2Q9Y6X3 613 aa10.63□□□□□ -0.71
CLSTN3-206ENST00000535668 PRAMEF2O60811 474 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 VAPBO95292 243 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 SLC16A8O95907 504 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 CATP04040 527 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 ERVK-10P10266 1014 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 NMBRP28336 390 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 PNLIPRP1P54315 467 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 CSE1LP55060 971 aaKnown RBP10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 RPS6KA1Q15418 735 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 MEI1Q5TIA1 1274 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 CYHR1Q6ZMK1 362 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 CENPUQ71F23 418 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 MCEMP1Q8IX19 187 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 C2orf73Q8N5S3 287 aaPredicted RBP10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 CCDC89Q8N998 374 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 PLPP5Q8NEB5 264 aa10.62□□□□□ -0.71
CLSTN3-206ENST00000535668 C8orf44Q96CB5 159 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms