RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 ZNF768Q9H5H4 540 aaKnown RBP14.97□□□□□ -0.01
CNN1-202ENST00000535659 PELI2Q9HAT8 420 aa14.97□□□□□ -0.01
CNN1-202ENST00000535659 INTS9Q9NV88 658 aaKnown RBP14.97□□□□□ -0.01
CNN1-202ENST00000535659 CLCA2Q9UQC9 943 aa14.97□□□□□ -0.01
CNN1-202ENST00000535659 OR2A25A4D2G3 310 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 NPHS1O60500 1241 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 NELFEP18615 380 aaKnown RBP14.96□□□□□ -0.02
CNN1-202ENST00000535659 GRK2P25098 689 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 VARSP26640 1264 aaKnown RBP14.96□□□□□ -0.02
CNN1-202ENST00000535659 CCNG1P51959 295 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 PDX1P52945 283 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 CLDN6P56747 220 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 CSNK1G2P78368 415 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 RELAQ04206 551 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 LCP2Q13094 533 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 DOC2AQ14183 400 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 PUM1Q14671 1186 aaKnown RBP eCLIP14.96□□□□□ -0.02
CNN1-202ENST00000535659 CHI3L2Q15782 390 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 TBCCQ15814 346 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 RBBP7Q16576 425 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 HES3Q5TGS1 186 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 ZCCHC23Q6ZST2 131 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 FRMD7Q6ZUT3 714 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 MILR1Q7Z6M3 343 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 TMPRSS11BQ86T26 416 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 PAQR7Q86WK9 346 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 TMPRSS12Q86WS5 348 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 FAM129CQ86XR2 697 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 C19orf47Q8N9M1 422 aaKnown RBP14.96□□□□□ -0.02
CNN1-202ENST00000535659 OR52B6Q8NGF0 335 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 GRAMD1AQ96CP6 724 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 WDR34Q96EX3 536 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 PTCD3Q96EY7 689 aaKnown RBP14.96□□□□□ -0.02
CNN1-202ENST00000535659 DEPDC7Q96QD5 511 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 TRMOQ9BU70 441 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 ACTR8Q9H981 624 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 PDE7BQ9NP56 450 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 BTRCQ9Y297 605 aa14.96□□□□□ -0.02
CNN1-202ENST00000535659 CSO75390 466 aaKnown RBP14.95□□□□□ -0.02
CNN1-202ENST00000535659 CLDN9O95484 217 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 OTCP00480 354 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 SERPINE1P05121 402 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 JUPP14923 745 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 BGNP21810 368 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 CXCR2P25025 360 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 CSTF2P33240 577 aaKnown RBP eCLIP14.95□□□□□ -0.02
CNN1-202ENST00000535659 GRK3P35626 688 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 SERPINB5P36952 375 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 ATP1A2P50993 1020 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 LAPTM5Q13571 262 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 E2F2Q14209 437 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 TMTC4Q5T4D3 741 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 LIPJQ5W064 366 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 DGLUCYQ7Z3D6 616 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 TRIM42Q8IWZ5 723 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 D2HGDHQ8N465 521 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 DCBLD1Q8N8Z6 715 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 AIF1LQ9BQI0 150 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 STRADBQ9C0K7 418 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 DRC3Q9H069 523 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 MANSC1Q9H8J5 431 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 FAM60AQ9NP50 221 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 SOHLH2Q9NX45 425 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 PILRAQ9UKJ1 303 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 STK38LQ9Y2H1 464 aa14.95□□□□□ -0.02
CNN1-202ENST00000535659 HGSO14964 777 aaPredicted RBP14.94□□□□□ -0.02
CNN1-202ENST00000535659 UGDHO60701 494 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 CTSVO60911 334 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 EBLN1P0CF75 366 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 HNF4AP41235 474 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 CCR10P46092 362 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 MEF2AQ02078 507 aaPredicted RBP14.94□□□□□ -0.02
CNN1-202ENST00000535659 GALNT1Q10472 559 aaPredicted RBP14.94□□□□□ -0.02
CNN1-202ENST00000535659 STX3Q13277 289 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 C16orf72Q14CZ0 275 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 HIST2H2ACQ16777 129 aaPredicted RBP14.94□□□□□ -0.02
CNN1-202ENST00000535659 ZC3H12BQ5HYM0 836 aaKnown RBP14.94□□□□□ -0.02
CNN1-202ENST00000535659 HIST2H2AA3Q6FI13 130 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 KRT78Q8N1N4 520 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 DNAJC22Q8N4W6 341 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 L3MBTL4Q8NA19 623 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 AGBL5Q8NDL9 886 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 DYDC1Q8WWB3 177 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 CDK15Q96Q40 435 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 ZNF382Q96SR6 550 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 EFCAB11Q9BUY7 163 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 PITHD1Q9GZP4 211 aaPredicted RBP14.94□□□□□ -0.02
CNN1-202ENST00000535659 GEMIN8Q9NWZ8 242 aaKnown RBP14.94□□□□□ -0.02
CNN1-202ENST00000535659 RNF11Q9Y3C5 154 aa14.94□□□□□ -0.02
CNN1-202ENST00000535659 A0A1B0GTL3 188 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 FEZF1A0PJY2 475 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 UBFD1O14562 309 aaKnown RBP14.93□□□□□ -0.02
CNN1-202ENST00000535659 LCMT2O60294 686 aaKnown RBP14.93□□□□□ -0.02
CNN1-202ENST00000535659 NRP2O60462 931 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 EZRP15311 586 aaKnown RBP14.93□□□□□ -0.02
CNN1-202ENST00000535659 ARL1P40616 181 aaPredicted RBP14.93□□□□□ -0.02
CNN1-202ENST00000535659 PKNOX1P55347 436 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 ERVPABLB-1P60509 514 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 SH3BP2P78314 561 aa14.93□□□□□ -0.02
CNN1-202ENST00000535659 TRAF3Q13114 568 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms