RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	EFCAB13	Q8IY85	973 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CMTM8	Q8IZV2	173 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ZBTB2	Q8N680	514 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	OR14L1P	Q8NHC6	308 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SGCD	Q92629	289 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TMEM18	Q96B42	140 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC41A2	Q96JW4	573 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TMEM68	Q96MH6	324 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	FAM110A	Q9BQ89	295 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TMEM121	Q9BTD3	319 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	LRRCC1	Q9C099	1032 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NPFFR1	Q9GZQ6	430 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	LIME1	Q9H400	295 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PLK3	Q9H4B4	646 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	C6orf106	Q9H6K1	298 aa	Predicted RBP	4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	RIOX1	Q9H6W3	641 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	LRTM1	Q9HBL6	345 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	EPB41L5	Q9HCM4	733 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GDF3	Q9NR23	364 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	OGFR	Q9NZT2	677 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SEC63	Q9UGP8	760 aa	Known RBP	4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	DBNL	Q9UJU6	430 aa	Known RBP	4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PLEKHA6	Q9Y2H5	1048 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	HERC1	Q15751	4861 aa		4.38	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MYH7	P12883	1935 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NOTCH3	Q9UM47	2321 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SCN8A	Q9UQD0	1980 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442		A0A1B0GUH1	482 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	UBE2C	O00762	179 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ADAM10	O14672	748 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CASC3	O15234	703 aa	Known RBP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	HS6ST1	O60243	411 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	DKC1	O60832	514 aa	Known RBP eCLIP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	RBMXL2	O75526	392 aa	Known RBP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	STAM2	O75886	525 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	RGS11	O94810	467 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TPPP	O94811	219 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NUDT3	O95989	172 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TFPI	P10646	304 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ITIH1	P19827	911 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	AVPR1A	P37288	418 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC15A1	P46059	708 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TPMT	P51580	245 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MFAP4	P55083	255 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CSNK1G2	P78368	415 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SORD	Q00796	357 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TFAP4	Q01664	338 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	EIF3I	Q13347	325 aa	Known RBP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	RASA2	Q15283	850 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	C6orf141	Q5SZD1	244 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	LRIF1	Q5T3J3	769 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GPR139	Q6DWJ6	353 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	HEPHL1	Q6MZM0	1159 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC18B1	Q6NT16	456 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	DENND5B	Q6ZUT9	1274 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	LINGO2	Q7L985	606 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TEX45	Q8NA69	505 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	KCTD6	Q8NC69	237 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GPT2	Q8TD30	523 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TMEM174	Q8WUU8	243 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PRCC	Q92733	491 aa	Predicted RBP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SAT2	Q96F10	170 aa	Predicted RBP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SLC45A3	Q96JT2	553 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ABHD1	Q96SE0	405 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	SECISBP2	Q96T21	854 aa	Known RBP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NCAPG	Q9BPX3	1015 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	WDR77	Q9BQA1	342 aa	Predicted RBP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	AP1M1	Q9BXS5	423 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TEX12	Q9BXU0	123 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	KRTAP9-9	Q9BYP9	154 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	KRTAP9-4	Q9BYQ2	154 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GIMAP4	Q9NUV9	329 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MRPL15	Q9P015	296 aa	Known RBP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PADI1	Q9ULC6	663 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MRPL11	Q9Y3B7	192 aa	Known RBP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PTRH2	Q9Y3E5	179 aa	Known RBP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ZNF711	Q9Y462	761 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	MAGED1	Q9Y5V3	778 aa	Predicted RBP	4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	COX11	Q9Y6N1	276 aa		4.37	□□□□□ -1.71
ECHDC1-223	ENST00000534442	LY6G6E	A0A0G2JKS1	128 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	RBMY1B	A6NDE4	496 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	RBMY1E	A6NEQ0	496 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442		E5RJQ4	531 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ADAMDEC1	O15204	470 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	RBMY1D	P0C7P1	496 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	DNASE1	P24855	282 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CHML	P26374	656 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CD27	P26842	260 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PON1	P27169	355 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	TKT	P29401	623 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	OXTR	P30559	389 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ETV5	P41161	510 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	PIK3CA	P42336	1068 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	COMP	P49747	757 aa	Predicted RBP	4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	GPC3	P51654	580 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	CDH12	P55289	794 aa		4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	ELAVL2	Q12926	359 aa	Known RBP	4.36	□□□□□ -1.71
ECHDC1-223	ENST00000534442	NAE1	Q13564	534 aa		4.36	□□□□□ -1.71

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