RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZDHHC12Q96GR4 267 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 COX14Q96I36 57 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF514Q96K75 400 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 WDR24Q96S15 920 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 TREX2Q9BQ50 279 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 CRACR2AQ9BSW2 395 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 TUBB2BQ9BVA1 445 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 TRIM62Q9BVG3 475 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 TLR10Q9BXR5 811 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 SLC39A8Q9C0K1 460 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 OR2AG1Q9H205 316 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 OSGEPL1Q9H4B0 414 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 PRDM13Q9H4Q3 707 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 RETREG1Q9H6L5 497 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 SYNCQ9H7C4 482 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 PDFQ9HBH1 243 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 NOD2Q9HC29 1040 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 SLC40A1Q9NP59 571 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 SLC22A11Q9NSA0 550 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 OXSMQ9NWU1 459 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ATXN10Q9UBB4 475 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 RNF7Q9UBF6 113 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 UBA2Q9UBT2 640 aaPredicted RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 SEC14L3Q9UDX4 400 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 FBXL4Q9UKA2 621 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 CDYLQ9Y232 598 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 MEMO1Q9Y316 297 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 SPO11Q9Y5K1 396 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 NOX1Q9Y5S8 564 aa2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 CFAP20Q9Y6A4 193 aaKnown RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF106Q9H2Y7 1883 aaKnown RBP2.86□□□□□ -1.95
CHMP4A-208ENST00000534106 KIR2DS5A0A0G2JLQ3 304 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 A0A0G2JNG1 304 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 RNF212BA8MTL3 300 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 PDZK1P1A8MUH7 402 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 TMEM150CB9EJG8 249 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 FAM227AF5H4B4 570 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 KIR2DS3K7RE56 304 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 PEX12O00623 359 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF749O43361 778 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 KCNAB3O43448 404 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 MED7O43513 233 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 SLC19A2O60779 497 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 PRAMEF4O60810 478 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 PRAMEF11O60813 436 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 MTX2O75431 263 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 PALMO75781 387 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 SPDEFO95238 335 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 JCHAINP01591 159 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 HEXAP06865 529 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 SPTBP11277 2137 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 UNGP13051 313 aaPredicted RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 PVRP15151 417 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 POLR2CP19387 275 aaPredicted RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 EPHB2P29323 1055 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 SERPINA4P29622 427 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 PRCPP42785 496 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 CAPZBP47756 277 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 ME1P48163 572 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 LMAN1P49257 510 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 NR0B1P51843 470 aaKnown RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 KPNA2P52292 529 aaKnown RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 SMSP52788 366 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 SOX8P57073 446 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 GEMIN4P57678 1058 aaKnown RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 MAXP61244 160 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 POLR2LP62875 67 aaKnown RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 PHC1P78364 1004 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 HSD11B2P80365 405 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 ACY1Q03154 408 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 ENPEPQ07075 957 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 SLC10A7Q0GE19 358 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 PEX6Q13608 980 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 KIR2DS5Q14953 304 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 TDRD12Q587J7 1177 aaKnown RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 DNTTIP2Q5QJE6 756 aaKnown RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 FAM102AQ5T9C2 384 aaPredicted RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 ARMC12Q5T9G4 340 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 AGAP7PQ5VUJ5 663 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 TAF3Q5VWG9 929 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 B3GNTL1Q67FW5 361 aaPredicted RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 LRRC66Q68CR7 880 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 ISM2Q6H9L7 571 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 KIRREL2Q6UWL6 708 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 IGFL2Q6UWQ7 119 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 FAM83HQ6ZRV2 1179 aaPredicted RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 MICALCLQ6ZW33 695 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 B4GALNT4Q76KP1 1039 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 SLC26A9Q7LBE3 791 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 DAAM2Q86T65 1068 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 DOLPP1Q86YN1 238 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 RAB43Q86YS6 212 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 CCDC71Q8IV32 467 aaPredicted RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF547Q8IVP9 402 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 MARVELD2Q8N4S9 558 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 RTL3Q8N8U3 475 aaKnown RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 ZNF397Q8NF99 534 aaPredicted RBP2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 EXD1Q8NHP7 514 aa2.85□□□□□ -1.95
CHMP4A-208ENST00000534106 PPP4R1Q8TF05 950 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms