RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 B3GAT2Q9NPZ5 323 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 SPHK2Q9NRA0 654 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 PANK4Q9NVE7 773 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 TEX10Q9NXF1 929 aaPredicted RBP2.31□□□□□ -2.04
ATM-220ENST00000533526 WDR35Q9P2L0 1181 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 THEGQ9P2T0 379 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 ELF5Q9UKW6 265 aaPredicted RBP2.31□□□□□ -2.04
ATM-220ENST00000533526 SMAD5-AS1Q9Y6J3 95 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 CSNK1G3Q9Y6M4 447 aa2.31□□□□□ -2.04
ATM-220ENST00000533526 A0A087WUV0 522 aaPredicted RBP2.3□□□□□ -2.04
ATM-220ENST00000533526 A0A1W2PPK0 400 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 MEX3AA1L020 520 aaKnown RBP2.3□□□□□ -2.04
ATM-220ENST00000533526 A8MXE2 369 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 SNURFLB1AK76 121 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 UBE2CO00762 179 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 P4HA2O15460 535 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 AP5Z1O43299 807 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 IDH3BO43837 385 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 CRLF1O75462 422 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 LUC7L3O95232 432 aaKnown RBP2.3□□□□□ -2.04
ATM-220ENST00000533526 ACSL3O95573 720 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 GGPS1O95749 300 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 CCDC175P0C221 793 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 RAPSNQ13702 412 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 RASA2Q15283 850 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 EXT1Q16394 746 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 SLC30A6Q6NXT4 461 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 CTR9Q6PD62 1173 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 C16orf54Q6UWD8 224 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 CLEC4GQ6UXB4 293 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 FRRS1Q6ZNA5 592 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 RCOR2Q8IZ40 523 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 GPC2Q8N158 579 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 LSMEM1Q8N8F7 131 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 PI4KAP1Q8N8J0 262 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 OR4D10Q8NGI6 311 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 C9orf43Q8TAL5 461 aaPredicted RBP2.3□□□□□ -2.04
ATM-220ENST00000533526 FAM222BQ8WU58 562 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 PIK3R3Q92569 461 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 EXT2Q93063 718 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 TSACCQ96A04 125 aaPredicted RBP2.3□□□□□ -2.04
ATM-220ENST00000533526 OTUB1Q96FW1 271 aaPredicted RBP2.3□□□□□ -2.04
ATM-220ENST00000533526 ZNF486Q96H40 463 aaPredicted RBP2.3□□□□□ -2.04
ATM-220ENST00000533526 AGAP4Q96P64 663 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 CCDC3Q9BQI4 270 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 PIGQQ9BRB3 760 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 SLC25A23Q9BV35 468 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 TDRD1Q9BXT4 1180 aaKnown RBP2.3□□□□□ -2.04
ATM-220ENST00000533526 SLC2A11Q9BYW1 496 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 XAB2Q9HCS7 855 aaKnown RBP2.3□□□□□ -2.04
ATM-220ENST00000533526 DNAJC4Q9NNZ3 241 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 NDE1Q9NXR1 346 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 NUDT4Q9NZJ9 180 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 CCL27Q9Y4X3 112 aa2.3□□□□□ -2.04
ATM-220ENST00000533526 IQCMA0A1B0GVH7 501 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 A0A1W2PR80 420 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 ASB14A6NK59 587 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 SOCS3O14543 225 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 TFECO14948 347 aaPredicted RBP2.29□□□□□ -2.04
ATM-220ENST00000533526 FIBPO43427 364 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 PLOD3O60568 738 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 TBX10O75333 385 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 ATP1B1P05026 303 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 CYP11B2P19099 503 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 ZNF10P21506 573 aaPredicted RBP2.29□□□□□ -2.04
ATM-220ENST00000533526 AADACP22760 399 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 BDNFP23560 247 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 SHC1P29353 583 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 CDC25CP30307 473 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 HSPA4P34932 840 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 SFTPDP35247 375 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 SOX3P41225 446 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 OR3A2P47893 321 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 XGP55808 180 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 KRTAP10-5P60370 271 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 MS4A2Q01362 244 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 NUCB1Q02818 461 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 CACNG1Q06432 222 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 RASGEF1BQ0VAM2 473 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 CALCOCO2Q13137 446 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 SRSF9Q13242 221 aaKnown RBP eCLIP2.29□□□□□ -2.04
ATM-220ENST00000533526 CDH18Q13634 790 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 NONOQ15233 471 aaKnown RBP eCLIP2.29□□□□□ -2.04
ATM-220ENST00000533526 SNAI3Q3KNW1 292 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 FAM174BQ3ZCQ3 159 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 GPR33Q49SQ1 333 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 GLIPR1L2Q4G1C9 344 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 FGD3Q5JSP0 725 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 SPOUT1Q5T280 376 aaKnown RBP2.29□□□□□ -2.04
ATM-220ENST00000533526 ENPP7Q6UWV6 458 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 KIF6Q6ZMV9 814 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 CCDC186Q7Z3E2 898 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 ZER1Q7Z7L7 766 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 AMIGO1Q86WK6 493 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 CCDC89Q8N998 374 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 CAMKVQ8NCB2 501 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 SLC26A7Q8TE54 656 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 CHURC1Q8WUH1 139 aa2.29□□□□□ -2.04
ATM-220ENST00000533526 SNRNP27Q8WVK2 155 aaKnown RBP2.29□□□□□ -2.04
ATM-220ENST00000533526 ZNF558Q96NG5 402 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms