RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 KATNA1O75449 491 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 SIX3O95343 332 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 C1GALT1C1LP0DN25 315 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 FGF5P12034 268 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 CDH1P12830 882 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 EZRP15311 586 aaKnown RBP10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 CREB1P16220 341 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 IMPDH1P20839 514 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 CXCR2P25025 360 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 EEF1DP29692 281 aaKnown RBP10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 ETV5P41161 510 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 PIK3CGP48736 1102 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 PRKAA2P54646 552 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 CSNK1G2P78368 415 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 NFKB2Q00653 900 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 GPR19Q15760 415 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 CATSPEREQ5SY80 951 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 IGF2-ASQ6U949 168 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 ZYG11AQ6WRX3 759 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 PAQR7Q86WK9 346 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 PPP1R3BQ86XI6 285 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 GPR135Q8IZ08 494 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 TEX9Q8N6V9 391 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 ARMC2Q8NEN0 867 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 OR4K1Q8NGD4 311 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 TCP10LQ8TDR4 215 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 PPP4R1Q8TF05 950 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 PRR11Q96HE9 360 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 FCRL4Q96PJ5 515 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 CTRCQ99895 268 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 ZFYVE21Q9BQ24 234 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 AIF1LQ9BQI0 150 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 DDA1Q9BW61 102 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 B3GNT4Q9C0J1 378 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 C12orf65Q9H3J6 166 aaKnown RBP10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 PELI2Q9HAT8 420 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 KCNK9Q9NPC2 374 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 IRAK4Q9NWZ3 460 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 PILRAQ9UKJ1 303 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 SH2B3Q9UQQ2 575 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 PCDHGA3Q9Y5H0 932 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 CNOT1A5YKK6 2376 aaKnown RBP10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 UNC13CQ8NB66 2214 aa10.78□□□□□ -0.68
TRAPPC4-211ENST00000533012 PMS2P1A4D2B8 440 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 TMEM150CB9EJG8 249 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 G3V2L1 256 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 E2F3O00716 465 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 NVLO15381 856 aaKnown RBP10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 TYROBPO43914 113 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 CTSVO60911 334 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 OR2B3O76000 313 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 DXOO77932 396 aaKnown RBP10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 RPS15AP62244 130 aaKnown RBP10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 HERVK_113P63132 956 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 IRF8Q02556 426 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 LAPTM5Q13571 262 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 GTF2H2Q13888 395 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 DEFB110Q30KQ9 67 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 XKR6Q5GH73 641 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 TCTE1Q5JU00 501 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 AGBL2Q5U5Z8 902 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 ATG9BQ674R7 924 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 GTF2H2CQ6P1K8 395 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 TLDC1Q6P9B6 456 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 SLCO4C1Q6ZQN7 724 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 TMPRSS11BQ86T26 416 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 KRT78Q8N1N4 520 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 ATP6V1E2Q96A05 226 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 RERGQ96A58 199 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZNF501Q96CX3 271 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 THAP11Q96EK4 314 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 FAM111AQ96PZ2 611 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 SELENOSQ9BQE4 189 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 ERVK-6Q9BXR3 956 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 EHD1Q9H4M9 534 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 IPPKQ9H8X2 491 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 APMAPQ9HDC9 416 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 THSD1Q9NS62 852 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 PSD3Q9NYI0 1048 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 COPG2Q9UBF2 871 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 ASB1Q9Y576 335 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 PCDHGA7Q9Y5G6 932 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 B3GALT1Q9Y5Z6 326 aa10.77□□□□□ -0.69
TRAPPC4-211ENST00000533012 SPTBN4Q9H254 2564 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 KCNE1BA0A087WTH5 132 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 TRBC2A0A5B9 178 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 FEZF1A0PJY2 475 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 LRRC14BA6NHZ5 514 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 C9orf172C9J069 976 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 E7EQ34 232 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 H0YGG7 62 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 TXNDC9O14530 226 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 HAT1O14929 419 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 TM9SF1O15321 606 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 PRPF4O43172 522 aaKnown RBP eCLIP10.76□□□□□ -0.698e-8■■■■□ 24.2
TRAPPC4-211ENST00000533012 OR1F1O43749 312 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 BRINP1O60477 761 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 SUPT7LO94864 414 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZWINTO95229 277 aa10.76□□□□□ -0.69
TRAPPC4-211ENST00000533012 EIF2S1P05198 315 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms