RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 KLC1Q07866 573 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 TEDDM1Q5T9Z0 273 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 YOD1Q5VVQ6 348 aaPredicted RBP16.96■□□□□ 0.31
SMG1-203ENST00000532700 STEAP4Q687X5 459 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 TMEM207Q6UWW9 146 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 PRSS41Q7RTY9 318 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 VN1R4Q7Z5H5 301 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 LMNTD2Q8IXW0 634 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 CSNK1A1LQ8N752 337 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 CPT1CQ8TCG5 803 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 CALML6Q8TD86 181 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 ZNF592Q92610 1267 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 C8orf44Q96CB5 159 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 C19orf60Q96EN9 201 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 KRT12Q99456 494 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 ZNF304Q9HCX3 659 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 TRMT6Q9UJA5 497 aaKnown RBP16.96■□□□□ 0.31
SMG1-203ENST00000532700 CDC23Q9UJX2 597 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 MAP4K5Q9Y4K4 846 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 DOPEY2Q9Y3R5 2298 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 H7BY64 318 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 URI1O94763 535 aaPredicted RBP16.95■□□□□ 0.3
SMG1-203ENST00000532700 SEC31AO94979 1220 aaKnown RBP16.95■□□□□ 0.3
SMG1-203ENST00000532700 ALBP02768 609 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 ENO3P13929 434 aaPredicted RBP16.95■□□□□ 0.3
SMG1-203ENST00000532700 GNLYP22749 145 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 RPL21P46778 160 aaKnown RBP16.95■□□□□ 0.3
SMG1-203ENST00000532700 MYBPC3Q14896 1274 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 PLEKHN1Q494U1 663 aaPredicted RBP16.95■□□□□ 0.3
SMG1-203ENST00000532700 VWA5B1Q5TIE3 1220 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 MAATS1Q7Z4T9 603 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 OR11G2Q8NGC1 345 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 STT3BQ8TCJ2 826 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 LINGO1Q96FE5 620 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 CABS1Q96KC9 395 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 PRAP1Q96NZ9 151 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 ATG10Q9H0Y0 220 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 COMMD10Q9Y6G5 202 aa16.95■□□□□ 0.3
SMG1-203ENST00000532700 PTPN13Q12923 2485 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 SCN3AQ9NY46 2000 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 PEX12O00623 359 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 NDC80O14777 642 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 ZGLP1P0C6A0 271 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 RNF224P0DH78 156 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 MAT1AQ00266 395 aaKnown RBP16.94■□□□□ 0.3
SMG1-203ENST00000532700 MORF4L2Q15014 288 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 INPP5JQ15735 1006 aaPredicted RBP16.94■□□□□ 0.3
SMG1-203ENST00000532700 PARP9Q8IXQ6 854 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 CLEC1AQ8NC01 280 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 COL26A1Q96A83 441 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 CCDC138Q96M89 665 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 IP6K3Q96PC2 410 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 ANKMY1Q9P2S6 941 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 NTNG1Q9Y2I2 539 aa16.94■□□□□ 0.3
SMG1-203ENST00000532700 IGLV3-12A0A075B6K2 115 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 A0A0A6YYC8 382 aaPredicted RBP16.93■□□□□ 0.3
SMG1-203ENST00000532700 FEZF1A0PJY2 475 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 CTAGE15A4D2H0 777 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 FAM187AA6NFU0 413 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 I3L1I5 382 aaPredicted RBP16.93■□□□□ 0.3
SMG1-203ENST00000532700 ZBTB14O43829 449 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 DPM1O60762 260 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 CELA2AP08217 269 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 EZRP15311 586 aaKnown RBP16.93■□□□□ 0.3
SMG1-203ENST00000532700 FBLP22087 321 aaKnown RBP16.93■□□□□ 0.3
SMG1-203ENST00000532700 FDXRP22570 491 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 SOX8P57073 446 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 ZNF460Q14592 562 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 WHAMMP3Q1A5X7 153 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 FAM214AQ32MH5 1076 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 HECTD2Q5U5R9 776 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 PRAMEF13Q5VWM6 474 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 AGTRAPQ6RW13 159 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 ZNF572Q7Z3I7 529 aaPredicted RBP16.93■□□□□ 0.3
SMG1-203ENST00000532700 ADCK2Q7Z695 626 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 CTAGE6Q86UF2 777 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 FER1L6-AS2Q96M78 137 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 CRB3Q9BUF7 120 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 SMYD2Q9NRG4 433 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 PCDHGB7Q9Y5F8 929 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 CPAMD8Q8IZJ3 1885 aa16.93■□□□□ 0.3
SMG1-203ENST00000532700 EFCAB8A8MWE9 144 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 EIF3FO00303 357 aaPredicted RBP16.92■□□□□ 0.3
SMG1-203ENST00000532700 LCMT2O60294 686 aaKnown RBP16.92■□□□□ 0.3
SMG1-203ENST00000532700 JRKO75564 520 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 TTC4O95801 387 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 ITGA3P26006 1051 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 BCL6P41182 706 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 CSNK1G2P78368 415 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 MRPL49Q13405 166 aaKnown RBP16.92■□□□□ 0.3
SMG1-203ENST00000532700 UBAP2LQ14157 1087 aaKnown RBP16.92■□□□□ 0.3
SMG1-203ENST00000532700 RBBP7Q16576 425 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 HIF1AQ16665 826 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 MUM1Q2TAK8 710 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 THEMIS2Q5TEJ8 643 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 FAAH2Q6GMR7 532 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 CUZD1Q86UP6 607 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 ZC3H7AQ8IWR0 971 aaKnown RBP16.92■□□□□ 0.3
SMG1-203ENST00000532700 GPATCH11Q8N954 259 aa16.92■□□□□ 0.3
SMG1-203ENST00000532700 BBOF1Q8ND07 529 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms