RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 KCNE1BA0A087WTH5 132 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 C21orf140B9A014 251 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 POC1B-GALNT4F8VUJ3 575 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 HAT1O14929 419 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 LCMT2O60294 686 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 CNOT3O75175 753 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 ANXA5P08758 320 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 HBQ1P09105 142 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 FURINP09958 794 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 MTHFD2P13995 350 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 HRH2P25021 359 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 VSX2P58304 361 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 NFKB2Q00653 900 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 SLC29A2Q14542 456 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 NAA25Q14CX7 972 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 UAP1Q16222 522 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 TCTE1Q5JU00 501 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 CDKL4Q5MAI5 379 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 THEMIS2Q5TEJ8 643 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 CAPN13Q6MZZ7 669 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 VN1R4Q7Z5H5 301 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 PLD6Q8N2A8 252 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 KCTD4Q8WVF5 259 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 ATL1Q8WXF7 558 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 N4BP2L2Q92802 583 aaPredicted RBP13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 MR1Q95460 341 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 CLIP3Q96DZ5 547 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 TM4SF19Q96DZ7 209 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 MED8Q96G25 268 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 TMEM79Q9BSE2 394 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 SARGQ9BW04 601 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 PTBP2Q9UKA9 531 aaKnown RBP13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 SLC22A14Q9Y267 594 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 ACOT9Q9Y305 439 aa13.32□□□□□ -0.28
TSPAN4-220ENST00000532375 PCSK5Q92824 1860 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 MED13Q9UHV7 2174 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 A0A096LPK6 155 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 P2RX6O15547 441 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 PRAMEF4O60810 478 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 KLF7O75840 302 aaPredicted RBP13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 RECKO95980 971 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 KLK3P07288 261 aaPredicted RBP13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 LTA4HP09960 611 aaKnown RBP13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 RAB40ALP0C0E4 278 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 CDH1P12830 882 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 EZRP15311 586 aaKnown RBP13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 TFEBP19484 476 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 GDF5P43026 501 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 MSH2P43246 934 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 HNMTP50135 292 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 SERPINB9P50453 376 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 EMP3P54852 163 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 GRM7Q14831 915 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 CATSPEREQ5SY80 951 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 C1orf189Q5VU69 101 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 FAM69BQ5VUD6 431 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 YOD1Q5VVQ6 348 aaPredicted RBP13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 PRAMEF9Q5VWM5 478 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 MRPL14Q6P1L8 145 aaKnown RBP13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 ADGRD1Q6QNK2 874 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 CCDC91Q7Z6B0 441 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 THOC6Q86W42 341 aaKnown RBP13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 C17orf64Q86WR6 236 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 GPSM1Q86YR5 675 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 PDPRQ8NCN5 879 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 PROKR1Q8TCW9 393 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 STARD8Q92502 1023 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 NEIL2Q969S2 332 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 KIAA1143Q96AT1 154 aaPredicted RBP13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 ALKBH8Q96BT7 664 aaKnown RBP13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 C10orf90Q96M02 699 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 BBC3Q96PG8 261 aaPredicted RBP13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 DPH2Q9BQC3 489 aaPredicted RBP13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 HAUS8Q9BT25 410 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 EFHD1Q9BUP0 239 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 GPR87Q9BY21 358 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 NLNQ9BYT8 704 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 FAM117AQ9C073 453 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 SPNS1Q9H2V7 528 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 NMRAL1Q9HBL8 299 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 CUTCQ9NTM9 273 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 ZNF358Q9NW07 568 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 WDR70Q9NW82 654 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 SRPK3Q9UPE1 567 aa13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 FARSAQ9Y285 508 aaKnown RBP13.31□□□□□ -0.28
TSPAN4-220ENST00000532375 A0A087X1B8 175 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 HYKKA2RU49 373 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 ZNF891A8MT65 544 aaPredicted RBP13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 DSCR3O14972 297 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 CREG1O75629 220 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 RFPL1O75677 317 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 KLHL2O95198 593 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 SLU7O95391 586 aaKnown RBP13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 INHBAP08476 426 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 EPORP19235 508 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 PTPN4P29074 926 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 TYK2P29597 1187 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 ARSFP54793 590 aa13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 RPS18P62269 152 aaKnown RBP13.3□□□□□ -0.28
TSPAN4-220ENST00000532375 VSNL1P62760 191 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms