RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 PYCR2Q96C36 320 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 WDR34Q96EX3 536 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 NTMT1Q9BV86 223 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 SARGQ9BW04 601 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 SEMA6CQ9H3T2 930 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 PELI2Q9HAT8 420 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 TAC3Q9UHF0 121 aa12.04□□□□□ -0.48
COPB1-208ENST00000532088 GOLGA4Q13439 2230 aaKnown RBP12.03□□□□□ -0.48
COPB1-208ENST00000532088 CLGNO14967 610 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 CCNT2O60583 730 aaKnown RBP12.03□□□□□ -0.48
COPB1-208ENST00000532088 SIX3O95343 332 aaPredicted RBP12.03□□□□□ -0.48
COPB1-208ENST00000532088 SERPINE1P05121 402 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 THRAP10827 490 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 GRK2P25098 689 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 CCKBRP32239 447 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 GDF5P43026 501 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 CFHR1Q03591 330 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 CLCQ05315 142 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 ZFP36L1Q07352 338 aaKnown RBP12.03□□□□□ -0.48
COPB1-208ENST00000532088 GTF2H2Q13888 395 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 SF1Q15637 639 aaKnown RBP12.03□□□□□ -0.48
COPB1-208ENST00000532088 C18orf21Q32NC0 220 aaPredicted RBP12.03□□□□□ -0.48
COPB1-208ENST00000532088 AMZ1Q400G9 498 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 CDCP2Q5VXM1 449 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 NKAIN2Q5VXU1 208 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 ZNF425Q6IV72 752 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 IRGCQ6NXR0 463 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 GTF2H2CQ6P1K8 395 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 FRMD7Q6ZUT3 714 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 SLITRK4Q8IW52 837 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 KIRREL3Q8IZU9 778 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 OR4K1Q8NGD4 311 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 CNDP1Q96KN2 507 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 TMEM74Q96NL1 305 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 NRTNQ99748 197 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 ZNF768Q9H5H4 540 aaKnown RBP12.03□□□□□ -0.48
COPB1-208ENST00000532088 MRPS30Q9NP92 439 aaKnown RBP12.03□□□□□ -0.48
COPB1-208ENST00000532088 TMEM184CQ9NVA4 438 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 SNX7Q9UNH6 387 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 ASB1Q9Y576 335 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 ANGPTL3Q9Y5C1 460 aa12.03□□□□□ -0.48
COPB1-208ENST00000532088 RIF1Q5UIP0 2472 aaKnown RBP12.02□□□□□ -0.48
COPB1-208ENST00000532088 OR2A25A4D2G3 310 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 TMEM114B3SHH9 223 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 KLF11O14901 512 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 HGSO14964 777 aaPredicted RBP12.02□□□□□ -0.49
COPB1-208ENST00000532088 SUPT7LO94864 414 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 ZBTB11O95625 1053 aaPredicted RBP12.02□□□□□ -0.49
COPB1-208ENST00000532088 OTCP00480 354 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 MSL3P1P0C860 447 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 EBLN1P0CF75 366 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 FGF3P11487 239 aaPredicted RBP12.02□□□□□ -0.49
COPB1-208ENST00000532088 CHN1P15882 459 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 EPORP19235 508 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 CXCR2P25025 360 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 GSTM2P28161 218 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 GRIA3P42263 894 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 NAGLUP54802 743 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 PKNOX1P55347 436 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 GFERP55789 205 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 INSM1Q01101 510 aaPredicted RBP12.02□□□□□ -0.49
COPB1-208ENST00000532088 LCP2Q13094 533 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 LAPTM5Q13571 262 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 GGTA1PQ4G0N0 100 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 CFAP157Q5JU67 520 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 LIPJQ5W064 366 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 ATG9BQ674R7 924 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 NXPE4Q6UWF7 544 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 RBM44Q6ZP01 1051 aaKnown RBP12.02□□□□□ -0.49
COPB1-208ENST00000532088 USP53Q70EK8 1073 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 GOLGA7Q7Z5G4 137 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 ARHGAP22Q7Z5H3 698 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 TAX1BP1Q86VP1 789 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 C2orf73Q8N5S3 287 aaPredicted RBP12.02□□□□□ -0.49
COPB1-208ENST00000532088 TEX9Q8N6V9 391 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 SNX31Q8N9S9 440 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 L3MBTL4Q8NA19 623 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 PPP4R1Q8TF05 950 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 KLHL6Q8WZ60 621 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 NEIL2Q969S2 332 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 COL26A1Q96A83 441 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 ESAMQ96AP7 390 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 TCTN2Q96GX1 697 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 SEC16BQ96JE7 1060 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 SLC41A2Q96JW4 573 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 TGM7Q96PF1 710 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 TRAPPC9Q96Q05 1148 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 ZNF382Q96SR6 550 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 PLCD4Q9BRC7 762 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 NUDT22Q9BRQ3 303 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 MECRQ9BV79 373 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 GATA5Q9BWX5 397 aaPredicted RBP12.02□□□□□ -0.49
COPB1-208ENST00000532088 DRC3Q9H069 523 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 GSTO2Q9H4Y5 243 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 NT5DC2Q9H857 520 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 ZBTB26Q9HCK0 441 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 ENAMQ9NRM1 1142 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 INTS9Q9NV88 658 aaKnown RBP12.02□□□□□ -0.49
COPB1-208ENST00000532088 FAM53CQ9NYF3 392 aa12.02□□□□□ -0.49
COPB1-208ENST00000532088 DLL3Q9NYJ7 618 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms