RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 CARTPTQ16568 116 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 EIF2S3LQ2VIR3 472 aaKnown RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 ANKRD55Q3KP44 614 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 POM121L1PQ3SYA9 428 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 CFAP221Q4G0U5 840 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 KCTD21Q4G0X4 260 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 AWAT1Q58HT5 328 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 ERICH6BQ5W0A0 696 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 NCR3LG1Q68D85 454 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 ZNF770Q6IQ21 691 aaPredicted RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 SHFQ7M4L6 423 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 DGLUCYQ7Z3D6 616 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 STHQ8IWL8 128 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 APCDD1Q8J025 514 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 LRRC43Q8N309 656 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 BMPERQ8N8U9 685 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 FAM184AQ8NB25 1140 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 ARRDC2Q8TBH0 407 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 WFIKKN2Q8TEU8 576 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 METTL21AQ8WXB1 218 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 HAS2Q92819 552 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 HAS1Q92839 578 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 MAP4K1Q92918 833 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 C16orf58Q96GQ5 468 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 SLC41A3Q96GZ6 507 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 PDLIM2Q96JY6 352 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 SENP8Q96LD8 212 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 LRFN5Q96NI6 719 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 GFM1Q96RP9 751 aaKnown RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 POLR3CQ9BUI4 534 aaPredicted RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 CAPS2Q9BXY5 557 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 PRRG4Q9BZD6 226 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 CRNKL1Q9BZJ0 848 aaKnown RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 FAM114A2Q9NRY5 505 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 GTSE1Q9NYZ3 720 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 NPAP1Q9NZP6 1156 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 THEGQ9P2T0 379 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 MALT1Q9UDY8 824 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 IL20RAQ9UHF4 553 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 BAIAP2L1Q9UHR4 511 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 RUVBL2Q9Y230 463 aaKnown RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 B3GALT5Q9Y2C3 310 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 YIPF1Q9Y548 306 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 SRPRBQ9Y5M8 271 aaKnown RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 ATXN2Q99700 1313 aaKnown RBP4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 TMEM94Q12767 1356 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 NPC1L1Q9UHC9 1359 aa4.09□□□□□ -1.75
AC055878.1-201ENST00000531858 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 MBLAC1A4D2B0 266 aaPredicted RBP4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 CASTOR2A6NHX0 329 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 ANKRD30BLA7E2S9 258 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 B4DGG1 531 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 E9PI62 339 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 MS4A18H0YCH9 400 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 M0R296 226 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 ZNF197O14709 1029 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 ARPC1BO15143 372 aaKnown RBP4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 CTAGE5O15320 804 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 PSMD3O43242 534 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 LANCL1O43813 399 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 NUAK1O60285 661 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 GPR137BO60478 399 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 SDC3O75056 442 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 ECI2O75521 394 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 SF3B1O75533 1304 aaKnown RBP eCLIP4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 WDPCPO95876 746 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 AGTP01019 485 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 SP9P0CG40 484 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 HAPLN1P10915 354 aaPredicted RBP4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 HSPA8P11142 646 aaKnown RBP4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 CEBPBP17676 345 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 WT1P19544 449 aaPredicted RBP4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 STIP1P31948 543 aaKnown RBP4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 STX2P32856 288 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 TAGLN2P37802 199 aaKnown RBP4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 OR3A3P47888 321 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 CEBPDP49716 269 aaPredicted RBP4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 SEC61BP60468 96 aaKnown RBP4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 RPP38P78345 283 aaKnown RBP4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 MBTD1Q05BQ5 628 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 CRYZQ08257 329 aaKnown RBP4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 DMP1Q13316 513 aaPredicted RBP4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 VEZF1Q14119 521 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 DPYSL2Q16555 572 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 STX1AQ16623 288 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 SLC9C1Q4G0N8 1177 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 LY6G5CQ5SRR4 150 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 TMEM71Q6P5X7 295 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 PACS1Q6VY07 963 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 B3GNT6Q6ZMB0 384 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 TMEM26Q6ZUK4 368 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 ATG9AQ7Z3C6 839 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 ANKRD33Q7Z3H0 272 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 VPS36Q86VN1 386 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 COMMD2Q86X83 199 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 FAM131BQ86XD5 332 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 THEM5Q8N1Q8 247 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 THAP8Q8NA92 274 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 COLGALT1Q8NBJ5 622 aa4.08□□□□□ -1.76
AC055878.1-201ENST00000531858 BHLHE23Q8NDY6 225 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms