RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ISLR2Q6UXK2 745 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 LAPTM4BQ86VI4 370 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 RERGQ96A58 199 aaPredicted RBP16.01■□□□□ 0.15
CPSF1-207ENST00000531727 C8orf44Q96CB5 159 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 OR2A5Q96R48 311 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 C14orf105Q9NVL8 296 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 TRPC4Q9UBN4 977 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 PCYOX1Q9UHG3 505 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 DHRS7Q9Y394 339 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 JRKLQ9Y4A0 524 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 COMMD10Q9Y6G5 202 aa16.01■□□□□ 0.15
CPSF1-207ENST00000531727 NSG1A0A0A6YYJ2 146 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 A0A1W2PQ72 361 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 A1L4Q6 167 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 IDSB3KWA1 339 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 SMAPO00193 183 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 TXNDC9O14530 226 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 SYF2O95926 243 aaKnown RBP16■□□□□ 0.15
CPSF1-207ENST00000531727 LDLRP01130 860 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 SLC26A3P40879 764 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 SKIV2L2P42285 1042 aaKnown RBP16■□□□□ 0.15
CPSF1-207ENST00000531727 EMP2P54851 167 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 MFAP5Q13361 173 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 LONRF1Q17RB8 773 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 CYHR1Q6ZMK1 362 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 KCNMB4Q86W47 210 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 SPNS2Q8IVW8 549 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 KBTBD2Q8IY47 623 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 LRRC56Q8IYG6 542 aaPredicted RBP16■□□□□ 0.15
CPSF1-207ENST00000531727 AGGF1Q8N302 714 aaeCLIP16■□□□□ 0.15
CPSF1-207ENST00000531727 ARHGEF39Q8N4T4 335 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 AMER3Q8N944 861 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 ST6GALNAC3Q8NDV1 305 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 CD200R1Q8TD46 325 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 CALML6Q8TD86 181 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 MMABQ96EY8 250 aaPredicted RBP16■□□□□ 0.15
CPSF1-207ENST00000531727 CNDP1Q96KN2 507 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 SIGLEC10Q96LC7 697 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 LMF1Q96S06 567 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 NAP1L3Q99457 506 aaPredicted RBP16■□□□□ 0.15
CPSF1-207ENST00000531727 GPR21Q99679 349 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 EBNA1BP2Q99848 306 aaKnown RBP16■□□□□ 0.15
CPSF1-207ENST00000531727 TGIF2Q9GZN2 237 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 MKKSQ9NPJ1 570 aaPredicted RBP16■□□□□ 0.15
CPSF1-207ENST00000531727 C20orf96Q9NUD7 363 aaPredicted RBP16■□□□□ 0.15
CPSF1-207ENST00000531727 FBXO5Q9UKT4 447 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 SLC5A6Q9Y289 635 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 MAD1L1Q9Y6D9 718 aa16■□□□□ 0.15
CPSF1-207ENST00000531727 ICE1Q9Y2F5 2266 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 MDC1Q14676 2089 aaKnown RBP15.99■□□□□ 0.15
CPSF1-207ENST00000531727 HEATR5BQ9P2D3 2071 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 PGRMC1O00264 195 aaKnown RBP15.99■□□□□ 0.15
CPSF1-207ENST00000531727 FFAR3O14843 346 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 HAT1O14929 419 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 GPR42O15529 346 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 FOXS1O43638 330 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 ZBTB14O43829 449 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 KLHL18O94889 574 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 ANXA5P08758 320 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 COX6A1P12074 109 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 MPP1Q00013 466 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 CDC16Q13042 620 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 TLR1Q15399 786 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 LINC00696Q6ZRV3 163 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 NDUFAF7Q7L592 441 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 ADCK2Q7Z695 626 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 CPNE9Q8IYJ1 553 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 NAT8LQ8N9F0 302 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 GRHL3Q8TE85 626 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 C5orf34Q96MH7 638 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 YIPF2Q9BWQ6 316 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 DRC3Q9H069 523 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 ABCF3Q9NUQ8 709 aa15.99■□□□□ 0.15
CPSF1-207ENST00000531727 IGHV1-45A0A0A0MS14 117 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 A0A0A6YYC8 382 aaPredicted RBP15.98■□□□□ 0.15
CPSF1-207ENST00000531727 I3L1I5 382 aaPredicted RBP15.98■□□□□ 0.15
CPSF1-207ENST00000531727 EIF3FO00303 357 aaPredicted RBP15.98■□□□□ 0.15
CPSF1-207ENST00000531727 PCDH17O14917 1159 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 P2RX6O15547 441 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 HAUS5O94927 633 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 HEXBP07686 556 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 PRR35P0CG20 571 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 FDXRP22570 491 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 CXCR2P25025 360 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 IMPA1P29218 277 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 FAM53BQ14153 422 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 THEMIS2Q5TEJ8 643 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 UBE2R2Q712K3 238 aaPredicted RBP15.98■□□□□ 0.15
CPSF1-207ENST00000531727 MAMDC2Q7Z304 686 aaPredicted RBP15.98■□□□□ 0.15
CPSF1-207ENST00000531727 PIWIL4Q7Z3Z4 852 aaKnown RBP15.98■□□□□ 0.15
CPSF1-207ENST00000531727 PLD3Q8IV08 490 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.98■□□□□ 0.15
CPSF1-207ENST00000531727 GRK7Q8WTQ7 553 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 FAM167BQ9BTA0 163 aa15.98■□□□□ 0.15
CPSF1-207ENST00000531727 AARSD1Q9BTE6 412 aaKnown RBP15.98■□□□□ 0.15
CPSF1-207ENST00000531727 SPTAN1Q13813 2472 aaKnown RBP15.97■□□□□ 0.15
CPSF1-207ENST00000531727 RP1L1Q8IWN7 2480 aaPredicted RBP15.97■□□□□ 0.15
CPSF1-207ENST00000531727 E2F3O00716 465 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 CLDN1O95832 211 aa15.97■□□□□ 0.15
CPSF1-207ENST00000531727 SERPINA7P05543 415 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms