RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 FAM186AA6NE01 2351 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 A0A0J9YY10 115 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 FEZF1A0PJY2 475 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 PRAMEF10O60809 474 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 MAGP20916 626 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 HMOX2P30519 316 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 CSF2RBP32927 897 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 GRIA3P42263 894 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 CSNK1G2P78368 415 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 ZRSR2Q15696 482 aaKnown RBP18.31■□□□□ 0.52
SMPD1-205ENST00000531303 TUBB8Q3ZCM7 444 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 LIPJQ5W064 366 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 SCIMPQ6UWF3 145 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 PLD3Q8IV08 490 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 L3MBTL4Q8NA19 623 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 ABHD11Q8NFV4 315 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 ZDHHC12Q96GR4 267 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 PPP1R36Q96LQ0 422 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 MAP3K3Q99759 626 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 NUDT22Q9BRQ3 303 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 LRRN3Q9H3W5 708 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 EPB41L1Q9H4G0 881 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 PELI2Q9HAT8 420 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 TRPS1Q9UHF7 1281 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 SNX7Q9UNH6 387 aa18.31■□□□□ 0.52
SMPD1-205ENST00000531303 COL5A1P20908 1838 aaPredicted RBP18.3■□□□□ 0.52
SMPD1-205ENST00000531303 MDC1Q14676 2089 aaKnown RBP18.3■□□□□ 0.52
SMPD1-205ENST00000531303 KCNE1BA0A087WTH5 132 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 SKAP2O75563 359 aaPredicted RBP18.3■□□□□ 0.52
SMPD1-205ENST00000531303 RASSF9O75901 435 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 SNUPNO95149 360 aaKnown RBP18.3■□□□□ 0.52
SMPD1-205ENST00000531303 ENO1P06733 434 aaKnown RBP18.3■□□□□ 0.52
SMPD1-205ENST00000531303 PCNAP12004 261 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 HOXB3P14651 431 aaPredicted RBP18.3■□□□□ 0.52
SMPD1-205ENST00000531303 JUPP14923 745 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 CASP2P42575 452 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 RBBP5Q15291 538 aaKnown RBP18.3■□□□□ 0.52
SMPD1-205ENST00000531303 TBCCQ15814 346 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 PDCD2Q16342 344 aaPredicted RBP18.3■□□□□ 0.52
SMPD1-205ENST00000531303 HIST2H2ACQ16777 129 aaPredicted RBP18.3■□□□□ 0.52
SMPD1-205ENST00000531303 KANK2Q63ZY3 851 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 HIST2H2AA3Q6FI13 130 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 GRHL2Q6ISB3 625 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 FIGLAQ6QHK4 219 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 CLYBLQ8N0X4 340 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 PIWIL2Q8TC59 973 aaKnown RBP18.3■□□□□ 0.52
SMPD1-205ENST00000531303 AIF1LQ9BQI0 150 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 NPHS2Q9NP85 383 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 TMEM184CQ9NVA4 438 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 BTRCQ9Y297 605 aa18.3■□□□□ 0.52
SMPD1-205ENST00000531303 A0A1W2PQM1 296 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 SLC9B1P1A6NJY1 282 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 UGDHO60701 494 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 SHOX2O60902 331 aaPredicted RBP18.29■□□□□ 0.52
SMPD1-205ENST00000531303 CBFA2T3O75081 653 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 FGF4P08620 206 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 UROSP10746 265 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 ST6GAL1P15907 406 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 HNF4AP41235 474 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 HTR6P50406 440 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 NEK2P51955 445 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 DDX39BQ13838 428 aaKnown RBP18.29■□□□□ 0.52
SMPD1-205ENST00000531303 PAGE2BQ5JRK9 111 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 CPLX4Q7Z7G2 160 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 PLXDC1Q8IUK5 500 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 AFAP1L2Q8N4X5 818 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 WDR34Q96EX3 536 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 HBEGFQ99075 208 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 EFCAB11Q9BUY7 163 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 EPN3Q9H201 632 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 SEMA6CQ9H3T2 930 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 EHD1Q9H4M9 534 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 HAO1Q9UJM8 370 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 PTGDR2Q9Y5Y4 395 aa18.29■□□□□ 0.52
SMPD1-205ENST00000531303 PTPRZ1P23471 2315 aaPredicted RBP18.28■□□□□ 0.52
SMPD1-205ENST00000531303 PCNX2A6NKB5 2137 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 A8MU76 341 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 MANBAO00462 879 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 HAT1O14929 419 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 OR1F1O43749 312 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 DRD4P21917 467 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 ACP1P24666 158 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 PCDH1Q08174 1060 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 CYP4F3Q08477 520 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 LAPTM5Q13571 262 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 GGTA1PQ4G0N0 100 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 CACHD1Q5VU97 1274 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 FCRL6Q6DN72 434 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 ADNP2Q6IQ32 1131 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 ZNF425Q6IV72 752 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 MED27Q6P2C8 311 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 PAQR7Q86WK9 346 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 FAM129CQ86XR2 697 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 WDR75Q8IWA0 830 aaKnown RBP18.28■□□□□ 0.52
SMPD1-205ENST00000531303 DDIASQ8IXT1 998 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 KIAA2013Q8IYS2 634 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 KRT78Q8N1N4 520 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 RNF175Q8N4F7 328 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 OR4K1Q8NGD4 311 aa18.28■□□□□ 0.52
SMPD1-205ENST00000531303 CDC6Q99741 560 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms