RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 FBXO30Q8TB52 745 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 TSPAN17Q96FV3 270 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 C8orf37Q96NL8 207 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 TMEM209Q96SK2 561 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 BBS2Q9BXC9 721 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 TMEM134Q9H6X4 195 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 QTRT2Q9H974 415 aaKnown RBP7.9□□□□□ -1.14
CSDE1-214ENST00000530886 SPON1Q9HCB6 807 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 SIRT5Q9NXA8 310 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 VNN3Q9NY84 501 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 RDH8Q9NYR8 311 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 SH3BP4Q9P0V3 963 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 AASSQ9UDR5 926 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 LIMD1Q9UGP4 676 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 UTS2RQ9UKP6 389 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 PCDHGA6Q9Y5G7 932 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 C7orf66A4D0T2 115 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 C2orf81A6NN90 581 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 ZNF670-ZNF695F2Z2N8 137 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 ST8SIA5O15466 376 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 PSMD3O43242 534 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 SELENOFO60613 162 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 MT-CO1P00395 513 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 LALBAP00709 142 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 ICAM1P05362 532 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 OR56A5P0C7T3 313 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 PRKAR1AP10644 381 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 FPR1P21462 350 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 LHCGRP22888 699 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 DNAJA1P31689 397 aaKnown RBP7.9□□□□□ -1.15
CSDE1-214ENST00000530886 RAB13P51153 203 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 DIO3P55073 304 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 GRM7Q14831 915 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 ETFDHQ16134 617 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 DUOXA2Q1HG44 320 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 Q3ZCU0 254 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 NHLRC3Q5JS37 347 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 PPP1R26Q5T8A7 1209 aaPredicted RBP7.9□□□□□ -1.15
CSDE1-214ENST00000530886 ARHGAP17Q68EM7 881 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 FAM131AQ6UXB0 335 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 ZSWIM9Q86XI8 627 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 EFHBQ8N7U6 833 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 SETD7Q8WTS6 366 aaKnown RBP7.9□□□□□ -1.15
CSDE1-214ENST00000530886 FAM129BQ96TA1 746 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 MLPHQ9BV36 600 aaPredicted RBP7.9□□□□□ -1.15
CSDE1-214ENST00000530886 PRR14Q9BWN1 585 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 COA1Q9GZY4 146 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 POLR3FQ9H1D9 316 aaPredicted RBP7.9□□□□□ -1.15
CSDE1-214ENST00000530886 SAV1Q9H4B6 383 aaPredicted RBP7.9□□□□□ -1.15
CSDE1-214ENST00000530886 ZCCHC4Q9H5U6 513 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 UCK1Q9HA47 277 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 CDH10Q9Y6N8 788 aa7.9□□□□□ -1.15
CSDE1-214ENST00000530886 NUP205Q92621 2012 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 KDM4FA0A1W2PPD8 638 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 UBA6A0AVT1 1052 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-214ENST00000530886 FAM220BPB1ANY3 271 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 C9JVG2 144 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 M0QYV0 167 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 CXCR6O00574 342 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 SSX5O60225 188 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 CACNG3O60359 315 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 PLOD3O60568 738 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 TSC22D2O75157 780 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 PTHP01270 115 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 SEMG1P04279 462 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 ITGB1P05556 798 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 CKMT1AP12532 417 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 CPB1P15086 417 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 SAT1P21673 171 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 PTPN3P26045 913 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 ARHGDIBP52566 201 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 HK3P52790 923 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 UFM1P61960 85 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 ERVK-8P63133 956 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 SLC6A3Q01959 620 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 PUDPQ08623 228 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 PRKG2Q13237 762 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 BAATQ14032 418 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-214ENST00000530886 SF3A2Q15428 464 aaKnown RBP7.89□□□□□ -1.15
CSDE1-214ENST00000530886 WSCD2Q2TBF2 565 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 C10orf62Q5T681 223 aaPredicted RBP7.89□□□□□ -1.15
CSDE1-214ENST00000530886 PKN3Q6P5Z2 889 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 ABHD15Q6UXT9 468 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 RPS27LQ71UM5 84 aaKnown RBP7.89□□□□□ -1.15
CSDE1-214ENST00000530886 GALNT5Q7Z7M9 940 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 SPATA6LQ8N4H0 392 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 DNAAF3Q8N9W5 541 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 OR4F6Q8NGB9 312 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 PROKR1Q8TCW9 393 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 UCN3Q969E3 161 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 MYLPFQ96A32 169 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 TMEM176AQ96HP8 235 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 PYURFQ96I23 114 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 ASPNQ9BXN1 380 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 ARHGAP39Q9C0H5 1083 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 ELOVL6Q9H5J4 265 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 ABCC13Q9NSE7 274 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 MARK1Q9P0L2 795 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 NDRG3Q9UGV2 375 aa7.89□□□□□ -1.15
CSDE1-214ENST00000530886 UTRNP46939 3433 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms