RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 GATA5Q9BWX5 397 aaPredicted RBP5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 TRIM2Q9C040 744 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 TWSG1Q9GZX9 223 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 PLEKHA2Q9HB19 425 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 UBE2TQ9NPD8 197 aaPredicted RBP5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 COX16Q9P0S2 106 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 SARDHQ9UL12 918 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 VANGL2Q9ULK5 521 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 COPG1Q9Y678 874 aaKnown RBP5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 SLC22A23A1A5C7 686 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 NEMP2A6NFY4 417 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 CGB1A6NKQ9 187 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 KPNA3O00505 521 aaPredicted RBP5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 PPP6CO00743 305 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 CNTN5O94779 1100 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 GP1BAP07359 652 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 RHOCP08134 193 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 LYL1P12980 280 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 PRLRP16471 622 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 HNRNPA2B1P22626 353 aaKnown RBP5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 DGKAP23743 735 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 CHRNA3P32297 505 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 USP8P40818 1118 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 UCNP55089 124 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 CDH4P55283 916 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 PITX1P78337 314 aaPredicted RBP5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 NME3Q13232 169 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 EIF4EBP2Q13542 120 aaPredicted RBP5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 TOMM20Q15388 145 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 ZNF284Q2VY69 593 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 PIP5KL1Q5T9C9 394 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 ISM2Q6H9L7 571 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 DGAT2L7PQ6IED9 249 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 SLC2A7Q6PXP3 512 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 ZNF813Q6ZN06 617 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 C11orf57Q6ZUT1 292 aaPredicted RBP5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 HORMAD1Q86X24 394 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 ERICH1Q86X53 443 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 ZNF398Q8TD17 642 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 PPP1R16AQ96I34 528 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 PPP1R13BQ96KQ4 1090 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 COG8Q96MW5 612 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 ZNF578Q96N58 590 aaPredicted RBP5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 CALN1Q9BXU9 219 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 SYNCQ9H7C4 482 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 TMEM51Q9NW97 253 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 NLGN3Q9NZ94 848 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 ANKMY1Q9P2S6 941 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 IL17BQ9UHF5 180 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 MAN1B1Q9UKM7 699 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 BAG5Q9UL15 447 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 HS3ST2Q9Y278 367 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 CA5BQ9Y2D0 317 aa5.07□□□□□ -1.6
AMBRA1-209ENST00000529963 ITPR3Q14573 2671 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 TP53BP1Q12888 1972 aaPredicted RBP5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 MGAQ8IWI9 3026 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 MBD3L5A6NJ08 208 aaPredicted RBP5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 F5H0A9 414 aaPredicted RBP5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 DAB1O75553 588 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 GRAP2O75791 330 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 PLAUP00749 431 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 TUBB4AP04350 444 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 ENO1P06733 434 aaKnown RBP5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 CTSLP07711 333 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 SRCP12931 536 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 ATP1A3P13637 1013 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 NR1H2P55055 460 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 STX17P56962 302 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 TMPRSS3P57727 454 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 TAS2R38P59533 333 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 ERVPABLB-1P60509 514 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 HNRNPKP61978 463 aaKnown RBP eCLIP5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 B4GALNT1Q00973 533 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 FOXF2Q12947 444 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 C5orf22Q49AR2 442 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 BRMS1LQ5PSV4 323 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 OR6B2Q6IFH4 312 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 SLC18B1Q6NT16 456 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 DPY19L2P1Q6NXN4 242 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 C22orf39Q6P5X5 142 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 TRIM65Q6PJ69 517 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 LRRC31Q6UY01 552 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 RBM44Q6ZP01 1051 aaKnown RBP5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 RINLQ6ZS11 566 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 FAM183BPQ6ZVS7 135 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 ERN2Q76MJ5 926 aaKnown RBP5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 PTAR1Q7Z6K3 402 aaPredicted RBP5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 ABI3BPQ7Z7G0 1075 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 SETD3Q86TU7 594 aaPredicted RBP5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 ZSCAN30Q86W11 494 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 SLC25A45Q8N413 288 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 DCAF4L2Q8NA75 395 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 C1orf131Q8NDD1 294 aaKnown RBP5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 OR52K2Q8NGK3 314 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 OR2A12Q8NGT7 310 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 MAPK15Q8TD08 544 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 KLK6Q92876 244 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 ARRDC3Q96B67 414 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 ERP27Q96DN0 273 aa5.06□□□□□ -1.6
AMBRA1-209ENST00000529963 ALG14Q96F25 216 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms