RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TAAR8Q969N4 342 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 RHBDF1Q96CC6 855 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 CCDC34Q96HJ3 373 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 CMTM3Q96MX0 182 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 PCGF1Q9BSM1 259 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 TCHPQ9BT92 498 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 KIFC3Q9BVG8 833 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 TRMT61BQ9BVS5 477 aaKnown RBP4.6□□□□□ -1.67
CSDE1-212ENST00000529046 CCSER1Q9C0I3 900 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 ASB7Q9H672 318 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 C8orf33Q9H7E9 229 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-212ENST00000529046 ZNF334Q9HCZ1 680 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-212ENST00000529046 ACSS1Q9NUB1 689 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-212ENST00000529046 SMARCAL1Q9NZC9 954 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 CACNG4Q9UBN1 327 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 FBXL5Q9UKA1 691 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 TTC7AQ9ULT0 858 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-212ENST00000529046 UBQLN1Q9UMX0 589 aaKnown RBP4.6□□□□□ -1.67
CSDE1-212ENST00000529046 MTF2Q9Y483 593 aaPredicted RBP4.6□□□□□ -1.67
CSDE1-212ENST00000529046 CLIC4Q9Y696 253 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 STYXL1Q9Y6J8 313 aa4.6□□□□□ -1.67
CSDE1-212ENST00000529046 RIF1Q5UIP0 2472 aaKnown RBP4.6□□□□□ -1.67
CSDE1-212ENST00000529046 WDR87Q6ZQQ6 2873 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 DMXL1Q9Y485 3027 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 FAM186AA6NE01 2351 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 MYO1GB0I1T2 1018 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 AKR1B15C9JRZ8 316 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 PIRO00625 290 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 PRRG1O14668 218 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 OGTO15294 1046 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 CHADO15335 359 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 SLC16A4O15374 487 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 SEC24AO95486 1093 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 RRM1P23921 792 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 MARCKSP29966 332 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 LONP1P36776 959 aaKnown RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 APOBEC1P41238 236 aaKnown RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 CCR2P41597 374 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 TUFMP49411 452 aaKnown RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 PDLIM4P50479 330 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 CCR3P51677 355 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 CLCNKAP51800 687 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 CLNS1AP54105 237 aaKnown RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 NAP1L1P55209 391 aaKnown RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 GTF2BQ00403 316 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 DLG1Q12959 904 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 MYBPHQ13203 477 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 IRF3Q14653 427 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 FAM78AQ5JUQ0 283 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 GLRA4Q5JXX5 417 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 PLEKHS1Q5SXH7 462 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 GKAP1Q5VSY0 366 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 TMEM154Q6P9G4 183 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 KCTD18Q6PI47 426 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 BRAT1Q6PJG6 821 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 HAUS6Q7Z4H7 955 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 RALGPS2Q86X27 583 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 FANCMQ8IYD8 2048 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 SPEM1Q8N4L4 309 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 PDILTQ8N807 584 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 SPATA18Q8TC71 538 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 C2orf15Q8WU43 125 aaKnown RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 RND1Q92730 232 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 RMDN1Q96DB5 314 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 GRAMD2BQ96HH9 432 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 EGLN2Q96KS0 407 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 HARBI1Q96MB7 349 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 CEP295NLQ96MC4 621 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 NOTCH4Q99466 2003 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 PLA2G2FQ9BZM2 168 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 C6orf106Q9H6K1 298 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 EIF2B3Q9NR50 452 aaKnown RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 HEBP1Q9NRV9 189 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 TMEM30AQ9NV96 361 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 NSMCE4AQ9NXX6 385 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 CPSF3Q9UKF6 684 aaKnown RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 C2CD2Q9Y426 696 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 TMEM184BQ9Y519 407 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-212ENST00000529046 NFS1Q9Y697 457 aa4.59□□□□□ -1.67
CSDE1-212ENST00000529046 CACNA1AO00555 2505 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 VWA8A3KMH1 1905 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 A0A1W2PR77 199 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 hDV102S1A0JD36 115 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 MYBPHLA2RUH7 354 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 A6NCN8 305 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 ZNF263O14978 683 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 VILLO15195 856 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 MID1O15344 667 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 CLDN14O95500 239 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 PLA2G4BP0C869 781 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 DAOP14920 347 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 CEBPBP17676 345 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 UGT1A1P22309 533 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 CSNK2A1P68400 391 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-212ENST00000529046 CSTF1Q05048 431 aaKnown RBP4.58□□□□□ -1.68
CSDE1-212ENST00000529046 TWF1Q12792 350 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 PRKG2Q13237 762 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 SPECC1Q5M775 1068 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 LRIF1Q5T3J3 769 aa4.58□□□□□ -1.68
CSDE1-212ENST00000529046 CENPPQ6IPU0 288 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms