RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 C2orf74A8MZ97 194 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 CCDC188H7C350 402 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 KPNA5O15131 536 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 NIPSNAP2O75323 286 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 BANF1O75531 89 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 KIAA0754O94854 1291 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 ESR1P03372 595 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 CHRM5P08912 532 aaPredicted RBP8.13□□□□□ -1.11
SSBP3-212ENST00000528930 MSL3P1P0C860 447 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 PKMP14618 531 aaKnown RBP8.13□□□□□ -1.11
SSBP3-212ENST00000528930 PVRP15151 417 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 CDH3P22223 829 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 PEBP1P30086 187 aaKnown RBP8.13□□□□□ -1.11
SSBP3-212ENST00000528930 SHMT2P34897 504 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 SLC1A2P43004 574 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 ARL4DP49703 201 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 IST1P53990 364 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 YBX1P67809 324 aaKnown RBP8.13□□□□□ -1.11
SSBP3-212ENST00000528930 CTBP1Q13363 440 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 TUBB3Q13509 450 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 TUBB2AQ13885 445 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 GPR19Q15760 415 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 PLEKHS1Q5SXH7 462 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 RNF187Q5TA31 235 aaPredicted RBP8.13□□□□□ -1.11
SSBP3-212ENST00000528930 IZUMO3Q5VZ72 239 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 CPZQ66K79 652 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 ZNF549Q6P9A3 640 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 SPESP1Q6UW49 350 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 C6orf15Q6UXA7 325 aaPredicted RBP8.13□□□□□ -1.11
SSBP3-212ENST00000528930 UNC5DQ6UXZ4 953 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 SYDE1Q6ZW31 735 aaPredicted RBP8.13□□□□□ -1.11
SSBP3-212ENST00000528930 PCGF5Q86SE9 256 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 FJX1Q86VR8 437 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 HOOK3Q86VS8 718 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 RASGRP3Q8IV61 690 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 IGDCC3Q8IVU1 814 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 ESX1Q8N693 406 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 OTUD6BQ8N6M0 293 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 LMNTD1Q8N9Z9 388 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 LINC01555Q8NAE3 123 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 ACBD4Q8NC06 268 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 CFAP61Q8NHU2 1237 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 NINJ1Q92982 152 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 STAMBPL1Q96FJ0 436 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 RUNDC3BQ96NL0 473 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 FCRL4Q96PJ5 515 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 OR2A14Q96R47 310 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 TRIM51Q9BSJ1 452 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 TUBB2BQ9BVA1 445 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 ULBP3Q9BZM4 244 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 KLHL25Q9H0H3 589 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 AKIRIN1Q9H9L7 192 aaPredicted RBP8.13□□□□□ -1.11
SSBP3-212ENST00000528930 PLAC1Q9HBJ0 212 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 PDE7BQ9NP56 450 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 FGF21Q9NSA1 209 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 INTS10Q9NVR2 710 aaKnown RBP8.13□□□□□ -1.11
SSBP3-212ENST00000528930 OR6C2Q9NZP2 312 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 RNF14Q9UBS8 474 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 TDRKHQ9Y2W6 561 aaKnown RBP8.13□□□□□ -1.11
SSBP3-212ENST00000528930 NFS1Q9Y697 457 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 MAD1L1Q9Y6D9 718 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 AKAP6Q13023 2319 aa8.13□□□□□ -1.11
SSBP3-212ENST00000528930 CHD3Q12873 2000 aaKnown RBP8.12□□□□□ -1.11
SSBP3-212ENST00000528930 H3BMM5 538 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 PFDN6O15212 129 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 TTI1O43156 1089 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 HCRTR1O43613 425 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 HAUS5O94927 633 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 MATN4O95460 622 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 C1orf105O95561 183 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 HEXAP06865 529 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 TUBBP07437 444 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 UGT2B7P16662 529 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 PGAM1P18669 254 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 CD9P21926 228 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 PKLRP30613 574 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 DNAJA1P31689 397 aaKnown RBP8.12□□□□□ -1.11
SSBP3-212ENST00000528930 PAFAH1B1P43034 410 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 GABRA4P48169 554 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 RAB28P51157 221 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 CLCN7P51798 805 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 DR1Q01658 176 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 THOC5Q13769 683 aaKnown RBP8.12□□□□□ -1.11
SSBP3-212ENST00000528930 CRYMQ14894 314 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 MORF4L2Q15014 288 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 TMED2Q15363 201 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 ZIC1Q15915 447 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 LONRF1Q17RB8 773 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 PLEKHN1Q494U1 663 aaPredicted RBP8.12□□□□□ -1.11
SSBP3-212ENST00000528930 CCSMST1Q4G0I0 132 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 HSP90AA5PQ58FG0 334 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 DCAF10Q5QP82 559 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 TMTC4Q5T4D3 741 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 PRAMEF17Q5VTA0 474 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 ZNF470Q6ECI4 717 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 HIBCHQ6NVY1 386 aaPredicted RBP8.12□□□□□ -1.11
SSBP3-212ENST00000528930 CYB5D1Q6P9G0 228 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 CDHR3Q6ZTQ4 885 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 OTOAQ7RTW8 1153 aa8.12□□□□□ -1.11
SSBP3-212ENST00000528930 TRIM73Q86UV7 250 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms