RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	MATN4	O95460	622 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	RPS3	P23396	243 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	NPY2R	P49146	381 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	MAT1A	Q00266	395 aa	Known RBP	10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	ZNF33B	Q06732	778 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	NAA25	Q14CX7	972 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	INA	Q16352	499 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	ZXDC	Q2QGD7	858 aa	Predicted RBP	10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	ACSBG2	Q5FVE4	666 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	CTSL3P	Q5NE16	218 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	RIPOR1	Q6ZS17	1223 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	AMER3	Q8N944	861 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	SMPDL3A	Q92484	453 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	RERG	Q96A58	199 aa	Predicted RBP	10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	MVB12A	Q96EY5	273 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	HES6	Q96HZ4	224 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	IMMP1L	Q96LU5	166 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	BIRC8	Q96P09	236 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	PKP4	Q99569	1192 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	TGIF2	Q9GZN2	237 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	SYNPO2L	Q9H987	977 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	CHST11	Q9NPF2	352 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	MKKS	Q9NPJ1	570 aa	Predicted RBP	10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	TREX1	Q9NSU2	369 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	RIC8B	Q9NVN3	520 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	SPATA7	Q9P0W8	599 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	PAK5	Q9P286	719 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	ABI3	Q9P2A4	366 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	ITGB1BP2	Q9UKP3	347 aa		10.79	□□□□□ -0.68
PTP4A2-211	ENST00000528840	LOC102723996	A0A087X1L8	192 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	IGHV3-20	A0A0C4DH32	117 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	IGKV1-8	A0A0C4DH67	115 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	OR5H15	A6NDH6	313 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	STATH	P02808	62 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	ESRRA	P11474	423 aa	Predicted RBP	10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	PKM	P14618	531 aa	Known RBP	10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	HOXB1	P14653	301 aa	Predicted RBP	10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	COX6B1	P14854	86 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	CA7	P43166	264 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	ST13	P50502	369 aa	Known RBP	10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	ZNF75D	P51815	510 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	PNLIPRP1	P54315	467 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	PMP22	Q01453	160 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	RBPJ	Q06330	500 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	PRDX1	Q06830	199 aa	Known RBP	10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	PCOLCE	Q15113	449 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	ZNF630	Q2M218	657 aa	Predicted RBP	10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	KLHL38	Q2WGJ6	581 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	MFSD4B	Q5TF39	518 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	GARNL3	Q5VVW2	1013 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	TMEM205	Q6UW68	189 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	ADCK2	Q7Z695	626 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	PAQR7	Q86WK9	346 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	SLC13A5	Q86YT5	568 aa	Predicted RBP	10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	MPP5	Q8N3R9	675 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	PPFIBP2	Q8ND30	876 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	METTL21A	Q8WXB1	218 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	MFSD3	Q96ES6	412 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	OR2A5	Q96R48	311 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	CYTH2	Q99418	400 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	BAG1	Q99933	345 aa	Predicted RBP	10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	IL22	Q9GZX6	179 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	C14orf105	Q9NVL8	296 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	UTP6	Q9NYH9	597 aa	Known RBP	10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	BFAR	Q9NZS9	450 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	TAC3	Q9UHF0	121 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	PCYOX1	Q9UHG3	505 aa		10.78	□□□□□ -0.68
PTP4A2-211	ENST00000528840	CENPE	Q02224	2701 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840		A0A1W2PQ72	361 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	OR2W5	A6NFC9	320 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	ARHGEF33	A8MVX0	844 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	TXNDC9	O14530	226 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	PHF2	O75151	1096 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	SYF2	O95926	243 aa	Known RBP	10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	C8orf89	P0DMQ9	161 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	MGAT1	P26572	445 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	HSD17B2	P37059	387 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	AVPR1B	P47901	424 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	EFNA3	P52797	238 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	CASP6	P55212	293 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	AP2B1	P63010	937 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	LONRF1	Q17RB8	773 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	SEL1L2	Q5TEA6	688 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	ICE2	Q659A1	982 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	FCRLB	Q6BAA4	426 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	ZNF425	Q6IV72	752 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	MRNIP	Q6NTE8	343 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	MTFR2	Q6P444	385 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	XKRX	Q6PP77	449 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	BNC2	Q6ZN30	1099 aa	Predicted RBP	10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	NEK10	Q6ZWH5	1172 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	PLD3	Q8IV08	490 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	ZC3H7A	Q8IWR0	971 aa	Known RBP	10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	SHISA5	Q8N114	240 aa		10.77	□□□□□ -0.69
PTP4A2-211	ENST00000528840	OR9A4	Q8NGU2	314 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms