RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 SKA2Q8WVK7 121 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-208ENST00000527323 COPS4Q9BT78 406 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 ITPAQ9BY32 194 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 ELOVL6Q9H5J4 265 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 CPNE5Q9HCH3 593 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 OARD1Q9Y530 152 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 COL4A6Q14031 1691 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 NUP214P35658 2090 aaPredicted RBP12.14□□□□□ -0.47
CAPN1-208ENST00000527323 TRBV5-3A0A0A0MS03 114 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 PRRG1O14668 218 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 GJB5O95377 273 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 PDYNP01213 254 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 FGBP02675 491 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 HOXB6P17509 224 aaKnown RBP12.14□□□□□ -0.47
CAPN1-208ENST00000527323 TACR1P25103 407 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 PBX2P40425 430 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 GZMMP51124 257 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 CLDN8P56748 225 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 BCL2A1Q16548 175 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 GPR153Q6NV75 609 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 DNAJB8Q8NHS0 232 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 PROX1Q92786 737 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 EGLN2Q96KS0 407 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 ACPTQ9BZG2 426 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 MMP27Q9H306 513 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 SERHLQ9NQF3 203 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 IL17CQ9P0M4 197 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 OSGIN1Q9UJX0 560 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 VPS4AQ9UN37 437 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 PRSS21Q9Y6M0 314 aa12.14□□□□□ -0.47
CAPN1-208ENST00000527323 MYOFQ9NZM1 2061 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 A8MX80 341 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 TLL1O43897 1013 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 RFPL2O75678 378 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 WDR47O94967 919 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 CLDN9O95484 217 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 PRAMEF1O95521 474 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 CPSF4O95639 269 aaKnown RBP12.13□□□□□ -0.47
CAPN1-208ENST00000527323 VIPP01282 170 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 IRS1P35568 1242 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 LIPAP38571 399 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 ERVFC1P60507 584 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 VLDLRP98155 873 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 SLC14A1Q13336 389 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 COL13A1Q5TAT6 717 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-208ENST00000527323 STEAP3Q658P3 488 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 CERS6Q6ZMG9 384 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 HEATR4Q86WZ0 1026 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 IPCEF1Q8WWN9 437 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-208ENST00000527323 POP5Q969H6 163 aaKnown RBP12.13□□□□□ -0.47
CAPN1-208ENST00000527323 PANX1Q96RD7 426 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 SLC22A12Q96S37 553 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 RPS6KA6Q9UK32 745 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 NDRG4Q9ULP0 352 aaKnown RBP12.13□□□□□ -0.47
CAPN1-208ENST00000527323 KNL1Q8NG31 2342 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 ISPDA4D126 451 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 OR2A25A4D2G3 310 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 C2orf78A6NCI8 922 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 CLIC1O00299 241 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 PCDHGA12O60330 932 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 IL1RNP18510 177 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 S100A1P23297 94 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 C21orf33P30042 268 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-208ENST00000527323 ATP5C1P36542 298 aaKnown RBP12.13□□□□□ -0.47
CAPN1-208ENST00000527323 NR4A2P43354 598 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 PPP3CCP48454 512 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 NPRL3Q12980 569 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 SMU1Q2TAY7 513 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 PDE12Q6L8Q7 609 aaKnown RBP12.13□□□□□ -0.47
CAPN1-208ENST00000527323 CCDC80Q76M96 950 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 CYP2U1Q7Z449 544 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 GALNT13Q8IUC8 556 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 CLIP4Q8N3C7 705 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 AMER2Q8N7J2 671 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 Q8N9G6 341 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-208ENST00000527323 FAM83FQ8NEG4 500 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-208ENST00000527323 ELMO1Q92556 727 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 WBP2Q969T9 261 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 APOLD1Q96LR9 279 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 BTBD2Q9BX70 525 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 SP140LQ9H930 580 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 TRPS1Q9UHF7 1281 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 ERVW-1Q9UQF0 538 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 RNF6Q9Y252 685 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 ATG2BQ96BY7 2078 aa12.13□□□□□ -0.47
CAPN1-208ENST00000527323 SAGE2PA6NJ88 616 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 CLDN24A6NM45 220 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 UPK3BL1B0FP48 263 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 UPK3BL2E5RIL1 263 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 CLDN11O75508 207 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 C1QCP02747 245 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 RPLP2P05387 115 aaKnown RBP12.12□□□□□ -0.47
CAPN1-208ENST00000527323 ZNF24P17028 368 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 ENGP17813 658 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 GADD45AP24522 165 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 KDELR2P33947 212 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 MAGEA2P43356 314 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 TIGD6Q17RP2 521 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 LRIF1Q5T3J3 769 aa12.12□□□□□ -0.47
CAPN1-208ENST00000527323 ATXN7L2Q5T6C5 722 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms