RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 GPR17Q13304 367 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 OS9Q13438 667 aaPredicted RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 RUNX3Q13761 415 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 ENPP2Q13822 863 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 GTF2H2Q13888 395 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 RUNX2Q13950 521 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 RNPS1Q15287 305 aaKnown RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 NAB2Q15742 525 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 PSMD5Q16401 504 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 TAF1BQ53T94 588 aaPredicted RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 XKR3Q5GH77 459 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 SIRPB2Q5JXA9 342 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 SFMBT2Q5VUG0 894 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 IRAK1BP1Q5VVH5 260 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 TWF2Q6IBS0 349 aaKnown RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 GTF2H2CQ6P1K8 395 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 NOTUMQ6P988 496 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 Q6ZS52 159 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 BBS12Q6ZW61 710 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 KRTAP5-5Q701N2 237 aaPredicted RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 CHST3Q7LGC8 479 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 IQCHQ86VS3 1027 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 FTSJ3Q8IY81 847 aaKnown RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 BEST3Q8N1M1 668 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 TMTC2Q8N394 836 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 SPATA6LQ8N4H0 392 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 SRBD1Q8N5C6 995 aaKnown RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 ZBTB2Q8N680 514 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 PCDH20Q8N6Y1 951 aaKnown RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 ACVR1CQ8NER5 493 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 APPL2Q8NEU8 664 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 ITFG1Q8TB96 612 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 TCP11Q8WWU5 503 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 RUFY2Q8WXA3 655 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 SKA1Q96BD8 255 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 SCRN2Q96FV2 425 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 ZC3HAV1LQ96H79 300 aaKnown RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 GRAMD2BQ96HH9 432 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 ST6GAL2Q96JF0 529 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 SLC41A2Q96JW4 573 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 LRR1Q96L50 414 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 TBATAQ96M53 351 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 CATSPER2Q96P56 530 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 FNBP1Q96RU3 617 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 CMKLR1Q99788 373 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 GABRG3Q99928 467 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 FAM110AQ9BQ89 295 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 REEP2Q9BRK0 252 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 POLR3CQ9BUI4 534 aaPredicted RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 RPP25Q9BUL9 199 aaKnown RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 HEMGNQ9BXL5 484 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 NUF2Q9BZD4 464 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 KRT23Q9C075 422 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 CCSER1Q9C0I3 900 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 SLC25A18Q9H1K4 315 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 KAT14Q9H8E8 782 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 ZNF302Q9NR11 478 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 NRBP2Q9NSY0 501 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 SLC38A7Q9NVC3 462 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 BEX4Q9NWD9 120 aaPredicted RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 C2orf42Q9NWW7 574 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 EHD2Q9NZN4 543 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 UXTQ9UBK9 157 aaPredicted RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 CTNNAL1Q9UBT7 734 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 FBXO9Q9UK97 447 aaPredicted RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 RCOR1Q9UKL0 485 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 SCML1Q9UN30 329 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 DAAM1Q9Y4D1 1078 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 RNF215Q9Y6U7 377 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 MYH15Q9Y2K3 1946 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 ZNF469Q96JG9 3925 aaPredicted RBP1.54□□□□□ -2.16
CD44-212ENST00000524922 AGRNO00468 2067 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 GON4LQ3T8J9 2241 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 ACANP16112 2415 aa1.54□□□□□ -2.16
CD44-212ENST00000524922 IGLV5-45A0A087WSX0 123 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 GOLGA6L10A0A0M3HER8 536 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 SPAARA0A1B0GVQ0 90 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 A0A1W2PP11 408 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 A0A1W2PQM1 296 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 MYH7BA7E2Y1 1941 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 CDRT15L2A8MXV6 281 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 SMIM1B2RUZ4 78 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 HIP1O00291 1037 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 SH2B2O14492 632 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 HOXC11O43248 304 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 PCDH7O60245 1069 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 RANBP6O60518 1105 aaKnown RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 TSPAN3O60637 253 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 MAGEC1O60732 1142 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 CTSVO60911 334 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 WDR1O75083 606 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 ZNF821O75541 412 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 PRDM1O75626 825 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 MTA2O94776 668 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 DDHD2O94830 711 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 OLFM2O95897 454 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 MT-CYBP00156 380 aaPredicted RBP1.53□□□□□ -2.16
CD44-212ENST00000524922 TSHBP01222 138 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 CALM1P0DP23 149 aa1.53□□□□□ -2.16
CD44-212ENST00000524922 CALM2P0DP24 149 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms