RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 CROTQ9UKG9 612 aa12.02□□□□□ -0.49
VEGFA-225ENST00000523950 RNF112Q9ULX5 631 aa12.02□□□□□ -0.49
VEGFA-225ENST00000523950 LHX6Q9UPM6 363 aa12.02□□□□□ -0.49
VEGFA-225ENST00000523950 PCDHGA4Q9Y5G9 962 aa12.02□□□□□ -0.49
VEGFA-225ENST00000523950 KCNE2Q9Y6J6 123 aa12.02□□□□□ -0.49
VEGFA-225ENST00000523950 MDC1Q14676 2089 aaKnown RBP12.02□□□□□ -0.49
VEGFA-225ENST00000523950 KCNE1BA0A087WTH5 132 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 A0A0J9YVX5 310 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 SYCE1LA8MT33 242 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 C9J4A7 227 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 H0YGG7 62 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 H7BY64 318 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 DSCR3O14972 297 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 ATP8B1O43520 1251 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 KERAO60938 352 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 KLHL2O95198 593 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 S100BP04271 92 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-225ENST00000523950 SNRPAP09012 282 aaKnown RBP12.01□□□□□ -0.49
VEGFA-225ENST00000523950 MYBL2P10244 700 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 PIM1P11309 404 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-225ENST00000523950 COL6A2P12110 1019 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 TFEBP19484 476 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 TCN2P20062 427 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 SLC6A12P48065 614 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 CCR8P51685 355 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 ARF3P61204 181 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-225ENST00000523950 RPS15P62841 145 aaKnown RBP12.01□□□□□ -0.49
VEGFA-225ENST00000523950 YBX1P67809 324 aaKnown RBP12.01□□□□□ -0.49
VEGFA-225ENST00000523950 CSNK1G2P78368 415 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 RHDQ02161 417 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 SLC29A2Q14542 456 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 ACAP2Q15057 778 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 OR4D1Q15615 310 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 ZXDCQ2QGD7 858 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-225ENST00000523950 PTCHD3Q3KNS1 767 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 PRAMEF17Q5VTA0 474 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 GARNL3Q5VVW2 1013 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 ADGRD1Q6QNK2 874 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 THOC6Q86W42 341 aaKnown RBP12.01□□□□□ -0.49
VEGFA-225ENST00000523950 GSPT2Q8IYD1 628 aaKnown RBP12.01□□□□□ -0.49
VEGFA-225ENST00000523950 CENPLQ8N0S6 344 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-225ENST00000523950 SPATA6LQ8N4H0 392 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 TBC1D19Q8N5T2 526 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 OR4K1Q8NGD4 311 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 UHMK1Q8TAS1 419 aaKnown RBP12.01□□□□□ -0.49
VEGFA-225ENST00000523950 SLC5A11Q8WWX8 675 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 STARD8Q92502 1023 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 ALKBH8Q96BT7 664 aaKnown RBP12.01□□□□□ -0.49
VEGFA-225ENST00000523950 PTERQ96BW5 349 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 PYCR2Q96C36 320 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 MVB12AQ96EY5 273 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 PRAP1Q96NZ9 151 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 CATSPER2Q96P56 530 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 GBP5Q96PP8 586 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 OR2A5Q96R48 311 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 ATOH8Q96SQ7 321 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 CAPS2Q9BXY5 557 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 NLNQ9BYT8 704 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 IGSF5Q9NSI5 407 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 CUEDC1Q9NWM3 386 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-225ENST00000523950 WWOXQ9NZC7 414 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 GPRC5BQ9NZH0 403 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 DYRK1BQ9Y463 629 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 SPTBP11277 2137 aa12.01□□□□□ -0.49
VEGFA-225ENST00000523950 ANKRD11Q6UB99 2663 aaPredicted RBP12□□□□□ -0.49
VEGFA-225ENST00000523950 IQANK1A0A1B0GTG1 560 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 A0A1B0GX78 115 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 HYKKA2RU49 373 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 HAT1O14929 419 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 WDR47O94967 919 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 ONECUT2O95948 504 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 TUBBP07437 444 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 PTPN4P29074 926 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 VSX2P58304 361 aaPredicted RBP12□□□□□ -0.49
VEGFA-225ENST00000523950 DCDP81605 110 aaKnown RBP12□□□□□ -0.49
VEGFA-225ENST00000523950 DLG1Q12959 904 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 SRSF6Q13247 344 aaKnown RBP12□□□□□ -0.49
VEGFA-225ENST00000523950 TSNAXIP1Q2TAA8 658 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 MUM1Q2TAK8 710 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 PRTGQ2VWP7 1150 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 WASHC2DQ5SRD0 308 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 ARHGAP40Q5TG30 622 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 FRMPD2BQ6IN97 320 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 PRMT9Q6P2P2 845 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 TIFABQ6ZNK6 161 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 SYVN1Q86TM6 617 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 LCA5Q86VQ0 697 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 CSNK1A1LQ8N752 337 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 KCTD4Q8WVF5 259 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 NXNL1Q96CM4 212 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 TSNARE1Q96NA8 513 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 OR4K3Q96R72 315 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 VPS11Q9H270 941 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 CHST8Q9H2A9 424 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 EPB41L4BQ9H329 900 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 ALG9Q9H6U8 611 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 PELI2Q9HAT8 420 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 CUTCQ9NTM9 273 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 CD274Q9NZQ7 290 aa12□□□□□ -0.49
VEGFA-225ENST00000523950 PSMC3IPQ9P2W1 217 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms