RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 ICE2Q659A1 982 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 WDR74Q6RFH5 385 aaPredicted RBP11.47□□□□□ -0.57
PVT1-215ENST00000522963 SPESP1Q6UW49 350 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 FRMD7Q6ZUT3 714 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 LSMEM2Q8N112 164 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 KDF1Q8NAX2 398 aaPredicted RBP11.47□□□□□ -0.57
PVT1-215ENST00000522963 OR2L3Q8NG85 312 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 PPP1R14CQ8TAE6 165 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 TRPC4APQ8TEL6 797 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 PPP4R1Q8TF05 950 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 SREK1Q8WXA9 508 aaKnown RBP11.47□□□□□ -0.57
PVT1-215ENST00000522963 NEIL2Q969S2 332 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 NOL11Q9H8H0 719 aaKnown RBP11.47□□□□□ -0.57
PVT1-215ENST00000522963 SLC6A20Q9NP91 592 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 SEMA4BQ9NPR2 832 aaPredicted RBP11.47□□□□□ -0.57
PVT1-215ENST00000522963 CUEDC1Q9NWM3 386 aaPredicted RBP11.47□□□□□ -0.57
PVT1-215ENST00000522963 GPRC5BQ9NZH0 403 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 DYRK1BQ9Y463 629 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 ANGPTL3Q9Y5C1 460 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 KCNE2Q9Y6J6 123 aa11.47□□□□□ -0.57
PVT1-215ENST00000522963 MN1Q10571 1320 aaPredicted RBP11.46□□□□□ -0.57
PVT1-215ENST00000522963 IGKV1-8A0A0C4DH67 115 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 A0A0J9YY10 115 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 A0A1B0GTL3 188 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 E7EQ34 232 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 OR7A17O14581 309 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 TLX3O43711 291 aaPredicted RBP11.46□□□□□ -0.57
PVT1-215ENST00000522963 ITM2AO43736 263 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 KIF1CO43896 1103 aaKnown RBP11.46□□□□□ -0.57
PVT1-215ENST00000522963 NPHS1O60500 1241 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 H2AFYO75367 372 aaKnown RBP11.46□□□□□ -0.57
PVT1-215ENST00000522963 C9P02748 559 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 CDH1P12830 882 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 PVRP15151 417 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 CMPK1P30085 196 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 ARRB2P32121 409 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 PIK3CGP48736 1102 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 ABATP80404 500 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 TRA2AQ13595 282 aaKnown RBP eCLIP11.46□□□□□ -0.57
PVT1-215ENST00000522963 RBBP7Q16576 425 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 TBC1D25Q3MII6 688 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 CATSPEREQ5SY80 951 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 CACHD1Q5VU97 1274 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 ATG14Q6ZNE5 492 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 C17orf64Q86WR6 236 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 PROSER1Q86XN7 944 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 AGBL5Q8NDL9 886 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 OR52B6Q8NGF0 335 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 DYDC1Q8WWB3 177 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 CKAP2Q8WWK9 683 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 SLC5A11Q8WWX8 675 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 FGF11Q92914 225 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 USP7Q93009 1102 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 ZDHHC12Q96GR4 267 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 PRR11Q96HE9 360 aaPredicted RBP11.46□□□□□ -0.57
PVT1-215ENST00000522963 CNDP1Q96KN2 507 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 SLC46A1Q96NT5 459 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 MAP3K3Q99759 626 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 KLHL25Q9H0H3 589 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 ZNF395Q9H8N7 513 aaPredicted RBP11.46□□□□□ -0.57
PVT1-215ENST00000522963 IPPKQ9H8X2 491 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 MRPS30Q9NP92 439 aaKnown RBP11.46□□□□□ -0.57
PVT1-215ENST00000522963 THSD1Q9NS62 852 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 OCIAD1Q9NX40 245 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 KLHL20Q9Y2M5 609 aa11.46□□□□□ -0.57
PVT1-215ENST00000522963 TLCD2A6NGC4 264 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 UBFD1O14562 309 aaKnown RBP11.45□□□□□ -0.58
PVT1-215ENST00000522963 HGSO14964 777 aaPredicted RBP11.45□□□□□ -0.58
PVT1-215ENST00000522963 CLGNO14967 610 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 NRP2O60462 931 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 PRAMEF10O60809 474 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 KATNA1O75449 491 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 LYPLA1O75608 230 aaPredicted RBP11.45□□□□□ -0.58
PVT1-215ENST00000522963 CCNDBP1O95273 360 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 FKBP9O95302 570 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 CAPNS1P04632 268 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 CHRNGP07510 517 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 GNAZP19086 355 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 CDH3P22223 829 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 VARSP26640 1264 aaKnown RBP11.45□□□□□ -0.58
PVT1-215ENST00000522963 SLC5A2P31639 672 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 GRIA3P42263 894 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 CCNG1P51959 295 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 GYS2P54840 703 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 NAA20P61599 178 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 PCDH1Q08174 1060 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 BST1Q10588 318 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 LCP2Q13094 533 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 TRAF3Q13114 568 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 CHIT1Q13231 466 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 STX3Q13277 289 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 RCN2Q14257 317 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 FAM219BQ5XKK7 198 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 ATG9BQ674R7 924 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 FIGLAQ6QHK4 219 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 NXPE4Q6UWF7 544 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 SLCO4C1Q6ZQN7 724 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 TMPRSS11BQ86T26 416 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 SYVN1Q86TM6 617 aa11.45□□□□□ -0.58
PVT1-215ENST00000522963 TRIM42Q8IWZ5 723 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 323.6 ms