RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 RGS4P49798 205 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 ARL4CP56559 192 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 SOX8P57073 446 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 KLC1Q07866 573 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 MYBPC3Q14896 1274 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 FASTKD3Q14CZ7 662 aaKnown RBP17.8■□□□□ 0.44
SPIDR-220ENST00000522900 HIF1AQ16665 826 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 ZXDCQ2QGD7 858 aaPredicted RBP17.8■□□□□ 0.44
SPIDR-220ENST00000522900 PRR30Q53SZ7 412 aaPredicted RBP17.8■□□□□ 0.44
SPIDR-220ENST00000522900 VWA2Q5GFL6 755 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 VWA5B1Q5TIE3 1220 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 HECTD2Q5U5R9 776 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 SLC6A19Q695T7 634 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 PRMT9Q6P2P2 845 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 LAPTM4BQ86VI4 370 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 GPATCH11Q8N954 259 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 GABPB2Q8TAK5 448 aaPredicted RBP17.8■□□□□ 0.44
SPIDR-220ENST00000522900 SNF8Q96H20 258 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 CCDC138Q96M89 665 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 OLFM1Q99784 485 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 PARVBQ9HBI1 364 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 ZBTB20Q9HC78 741 aaPredicted RBP17.8■□□□□ 0.44
SPIDR-220ENST00000522900 ATP13A2Q9NQ11 1180 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 VWA7Q9Y334 891 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 SNX24Q9Y343 169 aa17.8■□□□□ 0.44
SPIDR-220ENST00000522900 EFCAB8A8MWE9 144 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 FOXS1O43638 330 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 C8GP07360 202 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 ZGLP1P0C6A0 271 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 RPL21P46778 160 aaKnown RBP17.79■□□□□ 0.44
SPIDR-220ENST00000522900 EMP3P54852 163 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 TBPL1P62380 186 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 RELAQ04206 551 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 SRSF1Q07955 248 aaKnown RBP eCLIP17.79■□□□□ 0.44
SPIDR-220ENST00000522900 PLEKHN1Q494U1 663 aaPredicted RBP17.79■□□□□ 0.44
SPIDR-220ENST00000522900 AGTRAPQ6RW13 159 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 GALNT7Q86SF2 657 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 MYO1HQ8N1T3 1032 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 C17orf53Q8N3J3 647 aaPredicted RBP17.79■□□□□ 0.44
SPIDR-220ENST00000522900 CPT1CQ8TCG5 803 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 NACC2Q96BF6 587 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 ALKBH8Q96BT7 664 aaKnown RBP17.79■□□□□ 0.44
SPIDR-220ENST00000522900 LRRC39Q96DD0 335 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 MACROD1Q9BQ69 325 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 CCDC177Q9NQR7 707 aaPredicted RBP17.79■□□□□ 0.44
SPIDR-220ENST00000522900 TMEM184CQ9NVA4 438 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 UTP6Q9NYH9 597 aaKnown RBP17.79■□□□□ 0.44
SPIDR-220ENST00000522900 ZNF282Q9UDV7 671 aaPredicted RBP17.79■□□□□ 0.44
SPIDR-220ENST00000522900 NXT1Q9UKK6 140 aaKnown RBP17.79■□□□□ 0.44
SPIDR-220ENST00000522900 IKZF3Q9UKT9 509 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 MRPS2Q9Y399 296 aaKnown RBP17.79■□□□□ 0.44
SPIDR-220ENST00000522900 MAP4K5Q9Y4K4 846 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 PSAT1Q9Y617 370 aa17.79■□□□□ 0.44
SPIDR-220ENST00000522900 A0A0A6YYC8 382 aaPredicted RBP17.78■□□□□ 0.44
SPIDR-220ENST00000522900 I3L1I5 382 aaPredicted RBP17.78■□□□□ 0.44
SPIDR-220ENST00000522900 SLC16A5O15375 505 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 FBLP22087 321 aaKnown RBP17.78■□□□□ 0.44
SPIDR-220ENST00000522900 FDXRP22570 491 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 IL2P60568 153 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 OCA2Q04671 838 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 PDIA2Q13087 525 aaKnown RBP17.78■□□□□ 0.44
SPIDR-220ENST00000522900 AIMP2Q13155 320 aaKnown RBP17.78■□□□□ 0.44
SPIDR-220ENST00000522900 NAE1Q13564 534 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 RBBP7Q16576 425 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 PRAMEF13Q5VWM6 474 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 LRRC8EQ6NSJ5 796 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 TMEM207Q6UWW9 146 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 PARP9Q8IXQ6 854 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 PALM2Q8IXS6 379 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 SHISA5Q8N114 240 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 AMER3Q8N944 861 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 FBXO36Q8NEA4 188 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 OR11G2Q8NGC1 345 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 RERGQ96A58 199 aaPredicted RBP17.78■□□□□ 0.44
SPIDR-220ENST00000522900 MIEF2Q96C03 454 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 MMABQ96EY8 250 aaPredicted RBP17.78■□□□□ 0.44
SPIDR-220ENST00000522900 CRB3Q9BUF7 120 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 YIPF2Q9BWQ6 316 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 SEMA3GQ9NS98 782 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 C5AR2Q9P296 337 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 TRPC4Q9UBN4 977 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 RNF14Q9UBS8 474 aa17.78■□□□□ 0.44
SPIDR-220ENST00000522900 IGLV3-12A0A075B6K2 115 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 ITGA3P26006 1051 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 SLC26A3P40879 764 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 UQCRFS1P47985 274 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 CSNK1G2P78368 415 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 MGAT5Q09328 741 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 Q0VFX4 171 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 SP140Q13342 867 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 PDAP1Q13442 181 aaKnown RBP17.77■□□□□ 0.44
SPIDR-220ENST00000522900 INPP5JQ15735 1006 aaPredicted RBP17.77■□□□□ 0.44
SPIDR-220ENST00000522900 SYT16Q17RD7 645 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 VN1R4Q7Z5H5 301 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 PNPLA2Q96AD5 504 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 C8orf44Q96CB5 159 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 SGPP1Q9BX95 441 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 C3orf18Q9UK00 162 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 CDC14AQ9UNH5 594 aa17.77■□□□□ 0.44
SPIDR-220ENST00000522900 FLNCQ14315 2725 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms