RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 RAB42Q8N4Z0 105 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 MTFMTQ96DP5 389 aaKnown RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 PRAP1Q96NZ9 151 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 TGM7Q96PF1 710 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 IRF2BPLQ9H1B7 796 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 GSTO2Q9H4Y5 243 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 SLC32A1Q9H598 525 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 DNAAF2Q9NVR5 837 aaKnown RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 TMEM9Q9P0T7 183 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 HEATR5BQ9P2D3 2071 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 ENO4A6NNW6 628 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 K7EPI3 171 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 FCHO1O14526 889 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 FFAR3O14843 346 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 KLF11O14901 512 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 GPR42O15529 346 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 NUDT21O43809 227 aaKnown RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 SH3BGRLO75368 114 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 PSMG1O95456 288 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 ATXN8OSP0DMR3 200 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 HOXB3P14651 431 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 EPB42P16452 691 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 EPORP19235 508 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 VARSP26640 1264 aaKnown RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 PKLRP30613 574 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 CPA2P48052 419 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 FOXA1P55317 472 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 NR0B2Q15466 257 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 TMEM154Q6P9G4 183 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 EFL1Q7Z2Z2 1120 aaKnown RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 LRRC56Q8IYG6 542 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 FBXO15Q8NCQ5 510 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 ATL1Q8WXF7 558 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 CCDC126Q96EE4 140 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 CNDP2Q96KP4 475 aaKnown RBP11.93□□□□□ -0.5
PABPC1-219ENST00000522387 FCRL4Q96PJ5 515 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 CCDC3Q9BQI4 270 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 MID1IP1Q9NPA3 183 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 PNPOQ9NVS9 261 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 TAS2R1Q9NYW7 299 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 MID2Q9UJV3 735 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 TIMM22Q9Y584 194 aa11.93□□□□□ -0.5
PABPC1-219ENST00000522387 FRYQ5TBA9 3013 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 FEZF1A0PJY2 475 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 BIRC5O15392 142 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 YKT6O15498 198 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 B4GAT1O43505 415 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 PRAMEF4O60810 478 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 SNNO75324 88 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-219ENST00000522387 HSPA4LO95757 839 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 SHMT2P34897 504 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 GRK6P43250 576 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 SLC6A12P48065 614 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 MXRA7P84157 204 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 CDKL1Q00532 357 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 NFKB2Q00653 900 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 PRKAA1Q13131 559 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 CPSF6Q16630 551 aaKnown RBP eCLIP11.92□□□□□ -0.5
PABPC1-219ENST00000522387 TCHHL1Q5QJ38 904 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-219ENST00000522387 PRAMEF9Q5VWM5 478 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 PRAMEF13Q5VWM6 474 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 ADNP2Q6IQ32 1131 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 SCIMPQ6UWF3 145 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 C17orf82Q86X59 251 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-219ENST00000522387 CRLF3Q8IUI8 442 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 RNF175Q8N4F7 328 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 ZNF781Q8N8C0 355 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 CDYL2Q8N8U2 506 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 ZNF740Q8NDX6 193 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 OR2A1Q8NGT9 310 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 OR56A3Q8NH54 315 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 IFI44Q8TCB0 444 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 ZNF483Q8TF39 744 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-219ENST00000522387 NRG4Q8WWG1 115 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 SREK1Q8WXA9 508 aaKnown RBP11.92□□□□□ -0.5
PABPC1-219ENST00000522387 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.92□□□□□ -0.5
PABPC1-219ENST00000522387 ZNF225Q9UK10 706 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 RNF11Q9Y3C5 154 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 STX16-NPEPL1H3BU86 382 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 OR7A17O14581 309 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 STX16O14662 325 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 OR4F21O95013 312 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 SERPINE1P05121 402 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 RPS17P08708 135 aaKnown RBP11.92□□□□□ -0.5
PABPC1-219ENST00000522387 CDH1P12830 882 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 MAGP20916 626 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 SLC34A1Q06495 639 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 PCBP2Q15366 365 aaKnown RBP eCLIP11.92□□□□□ -0.58e-35■■■■■ 42
PABPC1-219ENST00000522387 XKR6Q5GH73 641 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 STPG1Q5TH74 334 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 KIAA1614Q5VZ46 1190 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 LRRC74BQ6ZQY2 392 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 FRMD7Q6ZUT3 714 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 TMPRSS9Q7Z410 1059 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 NAXDQ8IW45 347 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 LSMEM2Q8N112 164 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 RCBTB1Q8NDN9 531 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 OR2L8Q8NGY9 312 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 WDR60Q8WVS4 1066 aa11.92□□□□□ -0.5
PABPC1-219ENST00000522387 SMPDL3AQ92484 453 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms