RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 SPANXN3Q5MJ09 141 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 FHL5Q5TD97 284 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 IGFL3Q6UXB1 125 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 LAPTM4BQ86VI4 370 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 KLHL7Q8IXQ5 586 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 OR11G2Q8NGC1 345 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 EEF1AKMT1Q8WVE0 214 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 RERGQ96A58 199 aaPredicted RBP19.71■□□□□ 0.75
SDCBP-209ENST00000522243 C8orf44Q96CB5 159 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 SNRNP40Q96DI7 357 aaKnown RBP19.71■□□□□ 0.75
SDCBP-209ENST00000522243 PWWP2AQ96N64 755 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 PRAP1Q96NZ9 151 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 ILKAPQ9H0C8 392 aaPredicted RBP19.71■□□□□ 0.75
SDCBP-209ENST00000522243 UTP6Q9NYH9 597 aaKnown RBP19.71■□□□□ 0.75
SDCBP-209ENST00000522243 C3orf18Q9UK00 162 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 CSAG2Q9Y5P2 127 aa19.71■□□□□ 0.75
SDCBP-209ENST00000522243 P2RX6O15547 441 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 EZRP15311 586 aaKnown RBP19.7■□□□□ 0.74
SDCBP-209ENST00000522243 ABATP80404 500 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 Q0VFX4 171 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 HIF1AQ16665 826 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 IRAK1BP1Q5VVH5 260 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 UGT3A1Q6NUS8 523 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 PAQR3Q6TCH7 311 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 MBOAT1Q6ZNC8 495 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 PCGF5Q86SE9 256 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 IQCKQ8N0W5 287 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 TM9SF4Q92544 642 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 ALKBH8Q96BT7 664 aaKnown RBP19.7■□□□□ 0.74
SDCBP-209ENST00000522243 MMABQ96EY8 250 aaPredicted RBP19.7■□□□□ 0.74
SDCBP-209ENST00000522243 THOC3Q96J01 351 aaKnown RBP19.7■□□□□ 0.74
SDCBP-209ENST00000522243 ASF1BQ9NVP2 202 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 TRPC4Q9UBN4 977 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 CDC14AQ9UNH5 594 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 PDE10AQ9Y233 779 aa19.7■□□□□ 0.74
SDCBP-209ENST00000522243 A0A0A6YYC8 382 aaPredicted RBP19.69■□□□□ 0.74
SDCBP-209ENST00000522243 I3L1I5 382 aaPredicted RBP19.69■□□□□ 0.74
SDCBP-209ENST00000522243 MAP2K7O14733 419 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 AGFG2O95081 481 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 TTC4O95801 387 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 AHSGP02765 367 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 IVDP26440 423 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 GLRBP48167 497 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 PGGT1BP53609 377 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 EMP3P54852 163 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 CDKN2DP55273 166 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 TBPL1P62380 186 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 SYT16Q17RD7 645 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 EIF2S3LQ2VIR3 472 aaKnown RBP19.69■□□□□ 0.74
SDCBP-209ENST00000522243 FAAH2Q6GMR7 532 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 Q6ZS92 163 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 MCOLN3Q8TDD5 553 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 SLCO2A1Q92959 643 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 CERS2Q96G23 380 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 CFAP36Q96G28 342 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 ATG10Q9H0Y0 220 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 PPANQ9NQ55 473 aaKnown RBP19.69■□□□□ 0.74
SDCBP-209ENST00000522243 CCDC177Q9NQR7 707 aaPredicted RBP19.69■□□□□ 0.74
SDCBP-209ENST00000522243 TAS2R13Q9NYV9 303 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 CHMP2BQ9UQN3 213 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 SH2B3Q9UQQ2 575 aa19.69■□□□□ 0.74
SDCBP-209ENST00000522243 IGLV3-12A0A075B6K2 115 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 EIF3FO00303 357 aaPredicted RBP19.68■□□□□ 0.74
SDCBP-209ENST00000522243 FOXS1O43638 330 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 ANXA5P08758 320 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 ACPPP15309 386 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 ELK3P41970 407 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 RGS4P49798 205 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 EMP2P54851 167 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 SNRPNP63162 240 aaKnown RBP19.68■□□□□ 0.74
SDCBP-209ENST00000522243 DSG2Q14126 1118 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 AGAP7PQ5VUJ5 663 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 CUZD1Q86UP6 607 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 MYO1HQ8N1T3 1032 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 AMER3Q8N944 861 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 GABPB2Q8TAK5 448 aaPredicted RBP19.68■□□□□ 0.74
SDCBP-209ENST00000522243 LINGO1Q96FE5 620 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 VPS50Q96JG6 964 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 AGAP4Q96P64 663 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 SLC29A3Q9BZD2 475 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 LHPPQ9H008 270 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 ZNF160Q9HCG1 818 aa19.68■□□□□ 0.74
SDCBP-209ENST00000522243 MRPS2Q9Y399 296 aaKnown RBP19.68■□□□□ 0.74
SDCBP-209ENST00000522243 PRPF4O43172 522 aaKnown RBP eCLIP19.67■□□□□ 0.74
SDCBP-209ENST00000522243 SEMA7AO75326 666 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 HPP00738 406 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 C8GP07360 202 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 VARSP26640 1264 aaKnown RBP19.67■□□□□ 0.74
SDCBP-209ENST00000522243 GNG11P61952 73 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 MAT1AQ00266 395 aaKnown RBP19.67■□□□□ 0.74
SDCBP-209ENST00000522243 EEF1A2Q05639 463 aaKnown RBP19.67■□□□□ 0.74
SDCBP-209ENST00000522243 NR6A1Q15406 480 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 GARNL3Q5VVW2 1013 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 ATG9BQ674R7 924 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 LRRC8EQ6NSJ5 796 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 AGTRAPQ6RW13 159 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 CNTN4Q8IWV2 1026 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 PALM2Q8IXS6 379 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 ARHGEF39Q8N4T4 335 aa19.67■□□□□ 0.74
SDCBP-209ENST00000522243 PRR7Q8TB68 274 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms