RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 HOMEZQ8IX15 550 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 KRT78Q8N1N4 520 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 ATOH1Q92858 354 aaPredicted RBP20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 APOLD1Q96LR9 279 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 FRG2BQ96QU4 278 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 PHOX2BQ99453 314 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 AIF1LQ9BQI0 150 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 DPH7Q9BTV6 452 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 TWSG1Q9GZX9 223 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 IRF2BPLQ9H1B7 796 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 SPNS1Q9H2V7 528 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 SLC6A20Q9NP91 592 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 TCF7L2Q9NQB0 619 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 HEY2Q9UBP5 337 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 PCDHGA11Q9Y5H2 935 aa20.57■□□□□ 0.88
R3HCC1-208ENST00000522012 H0YIV9 168 aa20.56■□□□□ 0.88
R3HCC1-208ENST00000522012 PDYNP01213 254 aa20.56■□□□□ 0.88
R3HCC1-208ENST00000522012 PROS1P07225 676 aa20.56■□□□□ 0.88
R3HCC1-208ENST00000522012 FAM129CQ86XR2 697 aa20.56■□□□□ 0.88
R3HCC1-208ENST00000522012 ZNF740Q8NDX6 193 aa20.56■□□□□ 0.88
R3HCC1-208ENST00000522012 FLVCR1-AS1Q8TAF5 88 aa20.56■□□□□ 0.88
R3HCC1-208ENST00000522012 REPS1Q96D71 796 aa20.56■□□□□ 0.88
R3HCC1-208ENST00000522012 CCT7Q99832 543 aa20.56■□□□□ 0.88
R3HCC1-208ENST00000522012 KLHL20Q9Y2M5 609 aa20.56■□□□□ 0.88
R3HCC1-208ENST00000522012 TDRD6O60522 2096 aaKnown RBP20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 IGKV1-8A0A0C4DH67 115 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 CXCR2P25025 360 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 CSNK1G2P78368 415 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 DDX39BQ13838 428 aaKnown RBP20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 RBBP5Q15291 538 aaKnown RBP20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 LSM12Q3MHD2 195 aaKnown RBP20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 SPESP1Q6UW49 350 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 ZNF438Q7Z4V0 828 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 OR7G3Q8NG95 312 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 OR4K1Q8NGD4 311 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 USP7Q93009 1102 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 UBE2E3Q969T4 207 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 TUBGCP3Q96CW5 907 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 MAELQ96JY0 434 aaKnown RBP20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 PLCD4Q9BRC7 762 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 TMEM184CQ9NVA4 438 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 RIC8BQ9NVN3 520 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 SNX7Q9UNH6 387 aa20.55■□□□□ 0.88
R3HCC1-208ENST00000522012 LNP1A1A4G5 178 aa20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 SLC28A1O00337 649 aa20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 ZNF806P0C7X5 589 aa20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 HRH2P25021 359 aa20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 EPHA4P54764 986 aa20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 OR1D5P58170 312 aa20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 TUBB3Q13509 450 aa20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 SUZ12Q15022 739 aaKnown RBP20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 SF3A2Q15428 464 aaKnown RBP20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 TMIGD1Q6UXZ0 262 aa20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 Q8N9G6 341 aaPredicted RBP20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 WDR20Q8TBZ3 569 aa20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 ACTRT2Q8TDY3 377 aa20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 AHCYL2Q96HN2 611 aaKnown RBP20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 CCDC28BQ9BUN5 200 aa20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 AKTIPQ9H8T0 292 aa20.54■□□□□ 0.88
R3HCC1-208ENST00000522012 FEZF1A0PJY2 475 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 CPED1A4D0V7 1026 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 E9PBE3 544 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 RGS14O43566 566 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 KLHL41O60662 606 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 VPS4BO75351 444 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 GRIA3P42263 894 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 CAPZBP47756 277 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 PPP1CAP62136 330 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 REEP5Q00765 189 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 IMPG1Q17R60 797 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 SLC5A12Q1EHB4 618 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 XKR7Q5GH72 579 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 NKAIN2Q5VXU1 208 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 IRGCQ6NXR0 463 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 TRIM46Q7Z4K8 759 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 LAS2Q8IYD9 372 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 RNF175Q8N4F7 328 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 FAM181AQ8N9Y4 354 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 OR2T11Q8NH01 316 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 CEP70Q8NHQ1 597 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 MTERF1Q99551 399 aaKnown RBP20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 GIMAP2Q9UG22 337 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 KNL1Q8NG31 2342 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 ZW10O43264 779 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 OR1F1O43749 312 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 PEX11AO75192 247 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 GRK3P35626 688 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 GPR3P46089 330 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 HMGCS1Q01581 520 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 ADNP2Q6IQ32 1131 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 RNF165Q6ZSG1 346 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 Q6ZSR9 355 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 LARP4Q71RC2 724 aaKnown RBP eCLIP20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 MTDHQ86UE4 582 aaKnown RBP20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 PLD3Q8IV08 490 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 OR6C4Q8NGE1 309 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 HUS1BQ8NHY5 278 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 STON2Q8WXE9 905 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 NCSTNQ92542 709 aa20.53■□□□□ 0.88
R3HCC1-208ENST00000522012 CCDC74AQ96AQ1 378 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms