RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 POU2F1P14859 743 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 ZNF26P17031 533 aaPredicted RBP9.84□□□□□ -0.83
MCF2-209ENST00000520602 SDC1P18827 310 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 CA5AP35218 305 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 GJA8P48165 433 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 TAS2R50P59544 299 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 TBPL1P62380 186 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 HSPB3Q12988 150 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 XKR7Q5GH72 579 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 PRAMEF14Q5SWL7 426 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 PRAMEF13Q5VWM6 474 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 NEK5Q6P3R8 708 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 HEATR4Q86WZ0 1026 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 OR9A1PQ8NGU1 263 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 GTF2H4Q92759 462 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 EFCAB11Q9BUY7 163 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 TOR3AQ9H497 397 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 FANCEQ9HB96 536 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 RDH14Q9HBH5 336 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 C8orf4Q9NR00 106 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 IFT80Q9P2H3 777 aaPredicted RBP9.84□□□□□ -0.83
MCF2-209ENST00000520602 KCNK6Q9Y257 313 aa9.84□□□□□ -0.83
MCF2-209ENST00000520602 BCKDKO14874 412 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 LAMP1P11279 417 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 IL7RP16871 459 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 RRM2P31350 389 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 CCSMST1Q4G0I0 132 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 CATSPEREQ5SY80 951 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 LIPJQ5W064 366 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 ERICH5Q6P6B1 374 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 ERN2Q76MJ5 926 aaKnown RBP9.83□□□□□ -0.84
MCF2-209ENST00000520602 LRIG1Q96JA1 1093 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 EXOSC4Q9NPD3 245 aaKnown RBP9.83□□□□□ -0.84
MCF2-209ENST00000520602 ITM2CQ9NQX7 267 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 MAPRE3Q9UPY8 281 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 TPRKBQ9Y3C4 175 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 H3BN98 237 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 LATO43561 262 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 PABPC4LP0CB38 370 aaKnown RBP9.83□□□□□ -0.84
MCF2-209ENST00000520602 PPIBP23284 216 aaKnown RBP9.83□□□□□ -0.84
MCF2-209ENST00000520602 ELK4P28324 431 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 MAPK9P45984 424 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 CWF19L1Q69YN2 538 aaKnown RBP9.83□□□□□ -0.84
MCF2-209ENST00000520602 TNFAIP8L2Q6P589 184 aaPredicted RBP9.83□□□□□ -0.84
MCF2-209ENST00000520602 TMIGD1Q6UXZ0 262 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 CYHR1Q6ZMK1 362 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 PAGE2Q7Z2X7 111 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 FLCNQ8NFG4 579 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 ZFP28Q8NHY6 868 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 SNRNP27Q8WVK2 155 aaKnown RBP9.83□□□□□ -0.84
MCF2-209ENST00000520602 PROX1Q92786 737 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 SMARCD2Q92925 531 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 ZNF689Q96CS4 500 aaPredicted RBP9.83□□□□□ -0.84
MCF2-209ENST00000520602 PYURFQ96I23 114 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 KXD1Q9BQD3 176 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 RERGLQ9H628 205 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 CD320Q9NPF0 282 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 MSRAQ9UJ68 235 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 IGLON5A6NGN9 336 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 PLOD2O00469 737 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 SLC16A5O15375 505 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 RB1P06400 928 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 GGT1P19440 569 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 ALDH3A2P51648 485 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 PON2Q15165 354 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 CYP27C1Q4G0S4 372 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 MTSS1LQ765P7 747 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 PATL1Q86TB9 770 aaKnown RBP9.83□□□□□ -0.84
MCF2-209ENST00000520602 TMC8Q8IU68 726 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 NETO1Q8TDF5 533 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 XAGE5Q8WWM1 108 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 TMIGD2Q96BF3 282 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 ZNF597Q96LX8 424 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 QRFPRQ96P65 431 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 RHBGQ9H310 441 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 AMBNQ9NP70 447 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 AGPAT4Q9NRZ5 378 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 STOML2Q9UJZ1 356 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 DUSP12Q9UNI6 340 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 CORO2BQ9UQ03 480 aa9.83□□□□□ -0.84
MCF2-209ENST00000520602 PDCD11Q14690 1871 aaKnown RBP9.83□□□□□ -0.84
MCF2-209ENST00000520602 A0A096LPI6 279 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 H7BY64 318 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 RASAL1O95294 804 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 KRT75O95678 551 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 EIF2S1P05198 315 aaKnown RBP9.82□□□□□ -0.84
MCF2-209ENST00000520602 GSTM1P09488 218 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 KELP23276 732 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 PPP2R1BP30154 601 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 RPL3P39023 403 aaKnown RBP9.82□□□□□ -0.84
MCF2-209ENST00000520602 ADIPOR2Q86V24 386 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 OR7G3Q8NG95 312 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 OR5K1Q8NHB7 308 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 PHF10Q8WUB8 498 aaKnown RBP9.82□□□□□ -0.84
MCF2-209ENST00000520602 SLC5A11Q8WWX8 675 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 STON2Q8WXE9 905 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 SLCO4A1Q96BD0 722 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 PRAP1Q96NZ9 151 aa9.82□□□□□ -0.84
MCF2-209ENST00000520602 TRIT1Q9H3H1 467 aaKnown RBP9.82□□□□□ -0.84
MCF2-209ENST00000520602 WDR26Q9H7D7 661 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms