RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ZXDBP98169 803 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 TRAP1Q12931 704 aaKnown RBP4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 TTC31Q49AM3 519 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 DCAF10Q5QP82 559 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 PRAMEF8Q5VWM4 474 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 KCTD11Q693B1 232 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 CAPRIN2Q6IMN6 1127 aaKnown RBP4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 ZNF770Q6IQ21 691 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 FOXL2NBQ6ZUU3 175 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 RTN4RL2Q86UN3 420 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 CCDC60Q8IWA6 550 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 OLIG1Q8TAK6 271 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 ST7LQ8TDW4 575 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 ST6GAL2Q96JF0 529 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 ZNF583Q96ND8 569 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 PHPT1Q9NRX4 125 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 ECHDC1Q9NTX5 307 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 ANO10Q9NW15 660 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 FLRT3Q9NZU0 649 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 CHKBQ9Y259 395 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 PFASO15067 1338 aa4.86□□□□□ -1.63
HMGB1P46-201ENST00000520062 TRAV18A0A075B6X5 111 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 SLC9B1P1A6NJY1 282 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 C16orf97H3BN30 126 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 RTCAO00442 366 aaKnown RBP4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 ATP6V0E1O15342 81 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 SCO2O43819 266 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 BCAS2O75934 225 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 SP9P0CG40 484 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 IGHV4-38-2P0DP08 117 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 LIFP15018 202 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 THBS3P49746 956 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 SLC12A3P55017 1021 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 ILF3Q12906 894 aaKnown RBP eCLIP4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 IFI44LQ53G44 452 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 C20orf194Q5TEA3 1177 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 AGAP6Q5VW22 663 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 KLHL10Q6JEL2 608 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 ANO5Q75V66 913 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 EID3Q8N140 333 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 KIAA0895Q8NCT3 520 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 LRRC8CQ8TDW0 803 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 CFAP36Q96G28 342 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 NDNQ99608 321 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 OR2B2Q9GZK3 357 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 TSPYL1Q9H0U9 437 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 NAPBQ9H115 298 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 CPVLQ9H3G5 476 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 TFB2MQ9H5Q4 396 aaKnown RBP4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 C10orf88Q9H8K7 445 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 UPF2Q9HAU5 1272 aaKnown RBP4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 MRPL17Q9NRX2 175 aaKnown RBP4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 MIS18AQ9NYP9 233 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 GMEB2Q9UKD1 530 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 MAN1B1Q9UKM7 699 aa4.85□□□□□ -1.63
HMGB1P46-201ENST00000520062 C19orf81C9J6K1 198 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 ZNF197O14709 1029 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 BAG3O95817 575 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 NR3C1P04150 777 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 T-ENOLP0DO92 83 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 CETPP11597 493 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 CD59P13987 128 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 SFTPDP35247 375 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 MAGEB1P43366 347 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 OR3A3P47888 321 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 GAS1P54826 345 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 UCP2P55851 309 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 NANOS2P60321 138 aaKnown RBP4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 SLC34A1Q06495 639 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 CETN1Q12798 172 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 ACCSLQ4AC99 568 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 TTC27Q6P3X3 843 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 CTR9Q6PD62 1173 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 ZNF410Q86VK4 478 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 PRSS35Q8N3Z0 413 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 DNAJC22Q8N4W6 341 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 SCARB1Q8WTV0 552 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 NUDCD2Q8WVJ2 157 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 TMEM237Q96Q45 408 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 IDI2Q9BXS1 227 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 P2RY12Q9H244 342 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 RIMS4Q9H426 269 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 MAGEF1Q9HAY2 307 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 FAM118AQ9NWS6 357 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 P4HTMQ9NXG6 502 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 AGTPBP1Q9UPW5 1226 aa4.84□□□□□ -1.63
HMGB1P46-201ENST00000520062 A0A087X0K7 114 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 IGLV9-49A0A0B4J1Y8 123 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 TRBV2A0A0J9YWF9 115 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 C5orf51A6NDU8 294 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 INSIG1O15503 277 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 PRDM1O75626 825 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 KRT33AO76009 404 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 PTMAP06454 111 aaKnown RBP4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 SBK2P0C263 348 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 GAP43P17677 238 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 NR1D1P20393 614 aa4.83□□□□□ -1.64
HMGB1P46-201ENST00000520062 ELAVL4P26378 380 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms