RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 STRADBQ9C0K7 418 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 PITHD1Q9GZP4 211 aaPredicted RBP13.6□□□□□ -0.23
SDC2-203ENST00000519587 NOL11Q9H8H0 719 aaKnown RBP13.6□□□□□ -0.23
SDC2-203ENST00000519587 MANSC1Q9H8J5 431 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 SLC6A20Q9NP91 592 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 AKAP7Q9P0M2 348 aaPredicted RBP13.6□□□□□ -0.23
SDC2-203ENST00000519587 KLK4Q9Y5K2 254 aa13.6□□□□□ -0.23
SDC2-203ENST00000519587 CNOT1A5YKK6 2376 aaKnown RBP13.6□□□□□ -0.23
SDC2-203ENST00000519587 TM4SF5O14894 197 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 KLF11O14901 512 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 CRCPO75575 148 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 CLDN9O95484 217 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 ENO1P06733 434 aaKnown RBP13.59□□□□□ -0.23
SDC2-203ENST00000519587 FTH1P19P0C7X4 201 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 EBLN1P0CF75 366 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 C1GALT1C1LP0DN25 315 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 THRAP10827 490 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 HNF4AP41235 474 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 GRIA3P42263 894 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 CDH13P55290 713 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 GALNT1Q10472 559 aaPredicted RBP13.59□□□□□ -0.23
SDC2-203ENST00000519587 HIST2H2ACQ16777 129 aaPredicted RBP13.59□□□□□ -0.23
SDC2-203ENST00000519587 GGTA1PQ4G0N0 100 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 SNAP47Q5SQN1 464 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 C10orf62Q5T681 223 aaPredicted RBP13.59□□□□□ -0.23
SDC2-203ENST00000519587 PHF19Q5T6S3 580 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 KIAA1614Q5VZ46 1190 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 LIPJQ5W064 366 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 HIST2H2AA3Q6FI13 130 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 ZNF425Q6IV72 752 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 CYB5D1Q6P9G0 228 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 FIGLAQ6QHK4 219 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 SLCO4C1Q6ZQN7 724 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 CHCHD4Q8N4Q1 142 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 AFAP1L2Q8N4X5 818 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 GRAMD1AQ96CP6 724 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 WDR34Q96EX3 536 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 TCTN2Q96GX1 697 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 CCDC74BQ96LY2 380 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 MAGEB18Q96M61 343 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 TRAPPC9Q96Q05 1148 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 DEPDC7Q96QD5 511 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 PLCD4Q9BRC7 762 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 NTMT1Q9BV86 223 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 SLC29A3Q9BZD2 475 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 MID1IP1Q9NPA3 183 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 CUEDC1Q9NWM3 386 aaPredicted RBP13.59□□□□□ -0.23
SDC2-203ENST00000519587 SH2B3Q9UQQ2 575 aa13.59□□□□□ -0.23
SDC2-203ENST00000519587 CEP295Q9C0D2 2601 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 IGHV5-10-1A0A0J9YXX1 117 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 SPAARA0A1B0GVQ0 90 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 TRBC2A0A5B9 178 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 OR2A25A4D2G3 310 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 SLC9B1P1A6NJY1 282 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 OR7A17O14581 309 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 ESRRBO95718 433 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 CHEK2O96017 543 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 PVRP15151 417 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 EPORP19235 508 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 GSTM2P28161 218 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 SERPINB1P30740 379 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 CCKBRP32239 447 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 CASP2P42575 452 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 INHBCP55103 352 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 ABCE1P61221 599 aaKnown RBP13.58□□□□□ -0.24
SDC2-203ENST00000519587 RPS15AP62244 130 aaKnown RBP13.58□□□□□ -0.24
SDC2-203ENST00000519587 PHEXP78562 749 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 HSD11B2P80365 405 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 REEP5Q00765 189 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 CFHR1Q03591 330 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 RELAQ04206 551 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 BST1Q10588 318 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 TRAF3Q13114 568 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 SLBPQ14493 270 aaKnown RBP eCLIP13.58□□□□□ -0.24
SDC2-203ENST00000519587 ZC3H12BQ5HYM0 836 aaKnown RBP13.58□□□□□ -0.24
SDC2-203ENST00000519587 GRHL2Q6ISB3 625 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 RPS27LQ71UM5 84 aaKnown RBP13.58□□□□□ -0.24
SDC2-203ENST00000519587 MILR1Q7Z6M3 343 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 MTERF4Q7Z6M4 381 aaKnown RBP13.58□□□□□ -0.24
SDC2-203ENST00000519587 L3MBTL4Q8NA19 623 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 TTLQ8NG68 377 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 OR52B6Q8NGF0 335 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 OR6Y1Q8NGX8 325 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 CKAP2Q8WWK9 683 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 CHRNA10Q9GZZ6 450 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 ZNF768Q9H5H4 540 aaKnown RBP13.58□□□□□ -0.24
SDC2-203ENST00000519587 FANCEQ9HB96 536 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 ZBTB26Q9HCK0 441 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 PRM3Q9NNZ6 103 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 PDE7BQ9NP56 450 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 THAP1Q9NVV9 213 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 TOR4AQ9NXH8 423 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 TMEM9Q9P0T7 183 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 SEMA5BQ9P283 1151 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 PDP2Q9P2J9 529 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 TRPS1Q9UHF7 1281 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 BTRCQ9Y297 605 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 ADAMTS20P59510 1910 aa13.58□□□□□ -0.24
SDC2-203ENST00000519587 IGHV5-51A0A0C4DH38 117 aa13.57□□□□□ -0.24
SDC2-203ENST00000519587 H7BY64 318 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms