RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 TMEM74BQ9NUR3 256 aa13.99□□□□□ -0.17
CLN8-204ENST00000519254 C1orf109Q9NX04 203 aa13.99□□□□□ -0.17
CLN8-204ENST00000519254 ADA2Q9NZK5 511 aa13.99□□□□□ -0.17
CLN8-204ENST00000519254 PLAGL1Q9UM63 463 aa13.99□□□□□ -0.17
CLN8-204ENST00000519254 TRBV23OR9-2A0A075B6M9 112 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 FXYD1O00168 92 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 TRIM38O00635 465 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 SEC22BO75396 215 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 EEDO75530 441 aaKnown RBP13.98□□□□□ -0.17
CLN8-204ENST00000519254 RSL1D1O76021 490 aaKnown RBP13.98□□□□□ -0.17
CLN8-204ENST00000519254 GNSP15586 552 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 MAD2L1Q13257 205 aaPredicted RBP13.98□□□□□ -0.17
CLN8-204ENST00000519254 DOC2AQ14183 400 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 SIM2Q14190 667 aaPredicted RBP13.98□□□□□ -0.17
CLN8-204ENST00000519254 KRT33BQ14525 404 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 TLR1Q15399 786 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 TEAD4Q15561 434 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 CCDC6Q16204 474 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 LPAL2Q16609 132 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 IMPG1Q17R60 797 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 XKR6Q5GH73 641 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 FRG2Q64ET8 278 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 CAPRIN2Q6IMN6 1127 aaKnown RBP13.98□□□□□ -0.17
CLN8-204ENST00000519254 TAF8Q7Z7C8 310 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 LRRC56Q8IYG6 542 aaPredicted RBP13.98□□□□□ -0.17
CLN8-204ENST00000519254 LMNTD1Q8N9Z9 388 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 NUDT8Q8WV74 236 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 FRG2BQ96QU4 278 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 FERD3LQ96RJ6 166 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 LRRC61Q9BV99 259 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 TRIT1Q9H3H1 467 aaKnown RBP13.98□□□□□ -0.17
CLN8-204ENST00000519254 C11orf16Q9NQ32 467 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 ASIC5Q9NY37 505 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 SCHIP1Q9P0W5 487 aaPredicted RBP13.98□□□□□ -0.17
CLN8-204ENST00000519254 TMEM181Q9P2C4 612 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 CD300AQ9UGN4 299 aa13.98□□□□□ -0.17
CLN8-204ENST00000519254 SPAG17Q6Q759 2223 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 A0A1B0GTW7 788 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 ACOT8O14734 319 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 FKBP6O75344 327 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 CSF2P04141 144 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 RPN2P04844 631 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 NME1P15531 152 aaKnown RBP13.97□□□□□ -0.17
CLN8-204ENST00000519254 JAK1P23458 1154 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 PRPH2P23942 346 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 GCKP35557 465 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 PTDSS1P48651 473 aaKnown RBP13.97□□□□□ -0.17
CLN8-204ENST00000519254 SLC34A1Q06495 639 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 TSTA3Q13630 321 aaPredicted RBP13.97□□□□□ -0.17
CLN8-204ENST00000519254 ZNF528Q3MIS6 628 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 PAGE3Q5JUK9 113 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 AAGABQ6PD74 315 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 DCUN1D3Q8IWE4 304 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 MINDY1Q8N5J2 469 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 FAM156AQ8NDB6 213 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 OR5K2Q8NHB8 316 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 GPBAR1Q8TDU6 330 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 JADE3Q92613 823 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 NELL1Q92832 810 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 SGPP1Q9BX95 441 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 IL1RL2Q9HB29 575 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 S100A14Q9HCY8 104 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 SPAG4Q9NPE6 437 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 EIF3LQ9Y262 564 aaKnown RBP13.97□□□□□ -0.17
CLN8-204ENST00000519254 KMT2EQ8IZD2 1858 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 SDK1Q7Z5N4 2213 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 FANCMQ8IYD8 2048 aa13.97□□□□□ -0.17
CLN8-204ENST00000519254 PRORSD1PA6NEY8 169 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 CCDC154A6NI56 674 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 NPIPB8E9PQR5 432 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 MAP3K7O43318 606 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 SDC3O75056 442 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 ANPEPP15144 967 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 NPPBP16860 134 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 CASP2P42575 452 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 TBPL1P62380 186 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 AP2B1P63010 937 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 YBX1P67809 324 aaKnown RBP13.96□□□□□ -0.17
CLN8-204ENST00000519254 TAP2Q03519 686 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 E2F2Q14209 437 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 PTGR1Q14914 329 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 RPE65Q16518 533 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 TIGD2Q4W5G0 525 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 GRHL2Q6ISB3 625 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 CAPN13Q6MZZ7 669 aaPredicted RBP13.96□□□□□ -0.17
CLN8-204ENST00000519254 SUSD1Q6UWL2 747 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 SYTL1Q8IYJ3 562 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 LIX1Q8N485 282 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 RNF175Q8N4F7 328 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 HIPK4Q8NE63 616 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 WDR20Q8TBZ3 569 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 LMX1AQ8TE12 382 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 SLC26A7Q8TE54 656 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 NRG4Q8WWG1 115 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 PYDC1Q8WXC3 89 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 LRRC58Q96CX6 371 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 HOPXQ9BPY8 73 aaPredicted RBP13.96□□□□□ -0.17
CLN8-204ENST00000519254 GID8Q9NWU2 228 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 TAAR2Q9P1P5 351 aa13.96□□□□□ -0.17
CLN8-204ENST00000519254 PILRBQ9UKJ0 227 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms