RNA–Protein interactions for RNA: ENST00000519253.5

PCM1-212, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 6,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-212ENST00000519253 COMMD3Q9UBI1 195 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 PCDHB7Q9Y5E2 793 aa8.28□□□□□ -1.08
PCM1-212ENST00000519253 SPIN1Q9Y657 262 aaPredicted RBP8.28□□□□□ -1.08
PCM1-212ENST00000519253 FAM92AA1XBS5 289 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 NT5C1B-RDH14C9J2C7 533 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 CKMP06732 381 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 STSP08842 583 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 PTGS2P35354 604 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 PIK3CBP42338 1070 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 AP1S2P56377 157 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 BTG3Q14201 252 aaPredicted RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 BHLHB9Q6PI77 547 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 SNX29P2Q8IUI4 249 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 NACC2Q96BF6 587 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 ATG10Q9H0Y0 220 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 FAM83DQ9H4H8 585 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 C11orf16Q9NQ32 467 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 CPA4Q9UI42 421 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 SCML2Q9UQR0 700 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 A8MX80 341 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 FXYD1O00168 92 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 UBFD1O14562 309 aaKnown RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 IFNA7P01567 189 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 FYNP06241 537 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 CBSLP0DN79 551 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 NR2F1P10589 423 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 CSTF2P33240 577 aaKnown RBP eCLIP8.27□□□□□ -1.098e-7■■■■■ 29.7
PCM1-212ENST00000519253 CBSP35520 551 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 GDF5P43026 501 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 MAPK12P53778 367 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 FCGRTP55899 365 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 ST8SIA6P61647 398 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 SCARB2Q14108 478 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 TMEM44Q2T9K0 475 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 B3GNT8Q7Z7M8 397 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 FAM46DQ8NEK8 389 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 TIFAQ96CG3 184 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 ZNF583Q96ND8 569 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 KCNN2Q9H2S1 579 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 MS4A12Q9NXJ0 267 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 SLAMF8Q9P0V8 285 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 ZBTB42B2RXF5 422 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 HAS3O00219 553 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 CDRT1O95170 752 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 HAPLN1P10915 354 aaPredicted RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 PEPDP12955 493 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 BMP1P13497 986 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 ARSAP15289 507 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 ATN1P54259 1190 aaPredicted RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 CYP4F8P98187 520 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 FADDQ13158 208 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 ZNF467Q7Z7K2 595 aaPredicted RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 KRTCAP2Q8N6L1 136 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 NETO1Q8TDF5 533 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 IL4I1Q96RQ9 567 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 DOHHQ9BU89 302 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 SEMA3GQ9NS98 782 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 MRPS7Q9Y2R9 242 aaKnown RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 TAF1P21675 1872 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 SH3D21A4FU49 640 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 A8MV72 311 aaPredicted RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 JRKO75564 520 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 CLTBP09497 229 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 CXCR2P25025 360 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 UGT2B10P36537 528 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 ZNF630Q2M218 657 aaPredicted RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 UBE2UQ5VVX9 321 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 PPP2R2DQ66LE6 453 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 USP51Q70EK9 711 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 METTL4Q8N3J2 472 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 ZNF548Q8NEK5 533 aaPredicted RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 ZNF671Q8TAW3 534 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 JPH3Q8WXH2 748 aaPredicted RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 RFKQ969G6 155 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 TMEM80Q96HE8 168 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 PSKH2Q96QS6 385 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 C16orf70Q9BSU1 422 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 ZNF717Q9BY31 904 aaPredicted RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 AKAP7Q9P0M2 348 aaPredicted RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 SEC14L3Q9UDX4 400 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 MYO18AQ92614 2054 aaKnown RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 MYH14Q7Z406 1995 aaKnown RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 HMX3A6NHT5 357 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 HRH2P25021 359 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 CD52P31358 61 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 CA5AP35218 305 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 CDC20Q12834 499 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 HEPACAMQ14CZ8 416 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 ADPRMQ3LIE5 342 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 IL1RAPQ9NPH3 570 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 ERVK13-1Q9NX77 482 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 MAP4K5Q9Y4K4 846 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 UGT2A1Q9Y4X1 527 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 ZFP37Q9Y6Q3 630 aaPredicted RBP8.27□□□□□ -1.09
PCM1-212ENST00000519253 AP1M2Q9Y6Q5 423 aa8.27□□□□□ -1.09
PCM1-212ENST00000519253 PRAMEF33A0A0G2JMD5 474 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 LDB2O43679 373 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 PRAMEF10O60809 474 aa8.26□□□□□ -1.09
PCM1-212ENST00000519253 EIF2DP41214 584 aaKnown RBP8.26□□□□□ -1.09
PCM1-212ENST00000519253 ALFQ53S48 1182 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms