RNA–Protein interactions for RNA: ENST00000516826.1

RNU2-56P-201, Transcript of RNA, U2 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU2-56P, Length 190 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-56P-201ENST00000516826 CCDC60Q8IWA6 550 aaPredicted RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 CDK20Q8IZL9 346 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 LGI2Q8N0V4 545 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 RAB42Q8N4Z0 105 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 FAM89BQ8N5H3 189 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 NOA1Q8NC60 698 aaKnown RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 CAMKVQ8NCB2 501 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 SLC37A3Q8NCC5 494 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 KBTBD8Q8NFY9 601 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 SMAP2Q8WU79 429 aaPredicted RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 PIK3R3Q92569 461 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 PROX1Q92786 737 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 SLCO2A1Q92959 643 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 VPS33AQ96AX1 596 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 FER1L6-AS2Q96M78 137 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 LPAR4Q99677 370 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 BAG1Q99933 345 aaPredicted RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 CDK19Q9BWU1 502 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 CLEC7AQ9BXN2 247 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 TDRD1Q9BXT4 1180 aaKnown RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 SLC2A11Q9BYW1 496 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 EDEM3Q9BZQ6 932 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 CCDC177Q9NQR7 707 aaPredicted RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 BCCIPQ9P287 314 aaKnown RBP eCLIP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 TXNDC16Q9P2K2 825 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 FRMD4AQ9P2Q2 1039 aaPredicted RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 CFDP1Q9UEE9 299 aaPredicted RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 ELF5Q9UKW6 265 aaPredicted RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 EXOGQ9Y2C4 368 aaKnown RBP1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 HEG1Q9ULI3 1381 aa1.42□□□□□ -2.18
RNU2-56P-201ENST00000516826 IL16Q14005 1332 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 IGLV7-46A0A075B6I9 117 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 A0A0J9YWU9 116 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 A0A1W2PPR1 153 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 SHISA7A6NL88 538 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 ANXA2P2A6NMY6 339 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 KPNA7A9QM74 516 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 H7C0S8 307 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 H7C423 109 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 CCL24O00175 119 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 ZNF195O14628 629 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 EPHB6O15197 1021 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 SNX3O60493 162 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 NXPH2O95156 264 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 MOCS3O95396 460 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 CLDN1O95832 211 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 GSRP00390 522 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 QDPRP09417 244 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 PRG2P13727 222 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 DPEP1P16444 411 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 ERCC2P18074 760 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 ADRA2CP18825 462 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 ACAT1P24752 427 aaKnown RBP1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 HSPA4P34932 840 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 KRT20P35900 424 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 HSD17B3P37058 310 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 OPRL1P41146 370 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 OR3A2P47893 321 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 CDX1P47902 265 aaPredicted RBP1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 DNA2P51530 1060 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 MFAP3P55082 362 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 MYL7Q01449 175 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 SP3Q02447 781 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 CACNG1Q06432 222 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 ILF2Q12905 390 aaKnown RBP1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 CALCOCO2Q13137 446 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 DRP2Q13474 957 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 UGCGQ16739 394 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 CDO1Q16878 200 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 GLIPR1L2Q4G1C9 344 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 LACTB2Q53H82 288 aaPredicted RBP1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 LCN1P1Q5VSP4 162 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 LYSMD4Q5XG99 296 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 SPINK14Q6IE38 97 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 ENPP7Q6UWV6 458 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 FRRS1Q6ZNA5 592 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 FCRLAQ7L513 359 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 CPEB2Q7Z5Q1 589 aaKnown RBP1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 SLFN11Q7Z7L1 901 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 HOGA1Q86XE5 327 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 TIGD4Q8IY51 512 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 ZNF440Q8IYI8 595 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 RCOR2Q8IZ40 523 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 KLHDC1Q8N7A1 406 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 OR6J1Q8NGC5 347 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 OR2T6Q8NHC8 308 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 OCC1Q8TAD7 63 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 MAPK15Q8TD08 544 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 GTF3AQ92664 365 aaKnown RBP1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 RAD54LQ92698 747 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 ERO1AQ96HE7 468 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 CNDP2Q96KP4 475 aaKnown RBP1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 LURAP1Q96LR2 239 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 FAM218AQ96MZ4 157 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 SPAG5Q96R06 1193 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 USP28Q96RU2 1077 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 CDCA3Q99618 268 aaPredicted RBP1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 NKX3-1Q99801 234 aaPredicted RBP1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 PKP2Q99959 881 aa1.41□□□□□ -2.18
RNU2-56P-201ENST00000516826 CCDC3Q9BQI4 270 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms