RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 EEF1AKMT1Q8WVE0 214 aa13.02□□□□□ -0.33
TCOF1-215ENST00000515516 MMABQ96EY8 250 aaPredicted RBP13.02□□□□□ -0.33
TCOF1-215ENST00000515516 C10orf90Q96M02 699 aa13.02□□□□□ -0.33
TCOF1-215ENST00000515516 PRAP1Q96NZ9 151 aa13.02□□□□□ -0.33
TCOF1-215ENST00000515516 LHPPQ9H008 270 aa13.02□□□□□ -0.33
TCOF1-215ENST00000515516 PARVBQ9HBI1 364 aa13.02□□□□□ -0.33
TCOF1-215ENST00000515516 TMEM184CQ9NVA4 438 aa13.02□□□□□ -0.33
TCOF1-215ENST00000515516 TRPC4Q9UBN4 977 aa13.02□□□□□ -0.33
TCOF1-215ENST00000515516 RUVBL1Q9Y265 456 aaKnown RBP13.02□□□□□ -0.33
TCOF1-215ENST00000515516 UBR5O95071 2799 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-215ENST00000515516 IGKV1-8A0A0C4DH67 115 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 SLC16A5O15375 505 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 ALOX12BO75342 701 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 AGFG2O95081 481 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 MED26O95402 600 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 HPP00738 406 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 HEXBP07686 556 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 CCND1P24385 295 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 IMPA1P29218 277 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 AVPR1BP47901 424 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 UQCRFS1P47985 274 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 GLRBP48167 497 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 EMP2P54851 167 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 DR1Q01658 176 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 SP140Q13342 867 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 PDAP1Q13442 181 aaKnown RBP13.01□□□□□ -0.33
TCOF1-215ENST00000515516 HKDC1Q2TB90 917 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 VWA2Q5GFL6 755 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 TMEM151BQ8IW70 566 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 DTWD1Q8N5C7 304 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 OR11G2Q8NGC1 345 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 ALKBH8Q96BT7 664 aaKnown RBP13.01□□□□□ -0.33
TCOF1-215ENST00000515516 CERS2Q96G23 380 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 CFAP36Q96G28 342 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 THOC3Q96J01 351 aaKnown RBP13.01□□□□□ -0.33
TCOF1-215ENST00000515516 OR2A5Q96R48 311 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 TRIM54Q9BYV2 358 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 DRC3Q9H069 523 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 KCNF1Q9H3M0 494 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 EPS8L2Q9H6S3 715 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 LRRC4CQ9HCJ2 640 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 MKKSQ9NPJ1 570 aaPredicted RBP13.01□□□□□ -0.33
TCOF1-215ENST00000515516 C14orf105Q9NVL8 296 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 SAR1BQ9Y6B6 198 aa13.01□□□□□ -0.33
TCOF1-215ENST00000515516 SPTBP11277 2137 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 NSG1A0A0A6YYJ2 146 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 CLEC18AA5D8T8 446 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 PCDH17O14917 1159 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 HAT1O14929 419 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 BANF1O75531 89 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 AHSGP02765 367 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 UQCRHP07919 91 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 GRK3P35626 688 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 ARL4CP56559 192 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 IL2P60568 153 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 RPS15AP62244 130 aaKnown RBP13□□□□□ -0.33
TCOF1-215ENST00000515516 MSS51Q4VC12 460 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 PRR30Q53SZ7 412 aaPredicted RBP13□□□□□ -0.33
TCOF1-215ENST00000515516 HP1BP3Q5SSJ5 553 aaPredicted RBP13□□□□□ -0.33
TCOF1-215ENST00000515516 PAQR3Q6TCH7 311 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 CLEC18BQ6UXF7 455 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 C17orf64Q86WR6 236 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 CNTN4Q8IWV2 1026 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 KBTBD2Q8IY47 623 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 LRRC56Q8IYG6 542 aaPredicted RBP13□□□□□ -0.33
TCOF1-215ENST00000515516 CISD2Q8N5K1 135 aaKnown RBP13□□□□□ -0.33
TCOF1-215ENST00000515516 GPATCH11Q8N954 259 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 CLEC18CQ8NCF0 446 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 LRRC39Q96DD0 335 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 THAP11Q96EK4 314 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 LINGO1Q96FE5 620 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 NAPGQ99747 312 aaPredicted RBP13□□□□□ -0.33
TCOF1-215ENST00000515516 WDR77Q9BQA1 342 aaPredicted RBP13□□□□□ -0.33
TCOF1-215ENST00000515516 ZNF160Q9HCG1 818 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 CUEDC1Q9NWM3 386 aaPredicted RBP13□□□□□ -0.33
TCOF1-215ENST00000515516 CORO1CQ9ULV4 474 aaPredicted RBP13□□□□□ -0.33
TCOF1-215ENST00000515516 PDE10AQ9Y233 779 aa13□□□□□ -0.33
TCOF1-215ENST00000515516 COPG1Q9Y678 874 aaKnown RBP13□□□□□ -0.33
TCOF1-215ENST00000515516 SETXQ7Z333 2677 aaKnown RBP13□□□□□ -0.33
TCOF1-215ENST00000515516 IGLV3-12A0A075B6K2 115 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 A0A0A6YYC8 382 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-215ENST00000515516 IDSB3KWA1 339 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 TCP11X1B4DZS4 312 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 CCDC188H7C350 402 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 I3L1I5 382 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-215ENST00000515516 NDC80O14777 642 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 SLC26A3P40879 764 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 ELK3P41970 407 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 CDKN2DP55273 166 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 TBPL1P62380 186 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 NAE1Q13564 534 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 FAM53BQ14153 422 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 ELOAQ14241 798 aaKnown RBP12.99□□□□□ -0.33
TCOF1-215ENST00000515516 HIF1AQ16665 826 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 RBM20Q5T481 1227 aaKnown RBP12.99□□□□□ -0.33
TCOF1-215ENST00000515516 TEDDM1Q5T9Z0 273 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 CAPN13Q6MZZ7 669 aaPredicted RBP12.99□□□□□ -0.33
TCOF1-215ENST00000515516 FAM45BPQ6NSW5 357 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 AGTRAPQ6RW13 159 aa12.99□□□□□ -0.33
TCOF1-215ENST00000515516 ISLR2Q6UXK2 745 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms