RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 KCNE1BA0A087WTH5 132 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 LOC105369274A0A096LPK9 316 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 LOC102723532A0A0G2JNH3 316 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 ESYT3A0FGR9 886 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 CXorf49A8MYA2 514 aaPredicted RBP12.21□□□□□ -0.45
CLCN3-210ENST00000515420 NRP2O60462 931 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 RFPL1O75677 317 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 WISP3O95389 354 aaPredicted RBP12.21□□□□□ -0.45
CLCN3-210ENST00000515420 SPRP35270 261 aaPredicted RBP12.21□□□□□ -0.45
CLCN3-210ENST00000515420 RPS15AP62244 130 aaKnown RBP12.21□□□□□ -0.45
CLCN3-210ENST00000515420 YBX1P67809 324 aaKnown RBP12.21□□□□□ -0.45
CLCN3-210ENST00000515420 NAE1Q13564 534 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 SSPNQ14714 243 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 KBTBD12Q3ZCT8 623 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 GRTP1Q5TC63 336 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 C1orf189Q5VU69 101 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 GARNL3Q5VVW2 1013 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 MBOAT1Q6ZNC8 495 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 C17orf64Q86WR6 236 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 SPNS2Q8IVW8 549 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 OR4N4Q8N0Y3 316 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 CEP112Q8N8E3 955 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 OR2Y1Q8NGV0 311 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 OR56A3Q8NH54 315 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 RERGQ96A58 199 aaPredicted RBP12.21□□□□□ -0.45
CLCN3-210ENST00000515420 DERL2Q9GZP9 239 aa12.21□□□□□ -0.45
CLCN3-210ENST00000515420 NXT1Q9UKK6 140 aaKnown RBP12.21□□□□□ -0.45
CLCN3-210ENST00000515420 CFAP46Q8IYW2 2715 aa12.21□□□□□ -0.46
CLCN3-210ENST00000515420 HYKKA2RU49 373 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 B8ZZF3 427 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 H0YGG7 62 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 MKRN2OSH3BPM6 223 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 HAT1O14929 419 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 IGHEP01854 428 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 STMN1P16949 149 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 ITGAXP20702 1163 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 SAT1P21673 171 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 ALAS2P22557 587 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 FOLR3P41439 243 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 HNMTP50135 292 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 RRADP55042 308 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 ARF3P61204 181 aaPredicted RBP12.2□□□□□ -0.46
CLCN3-210ENST00000515420 ZKSCAN8Q15776 578 aaPredicted RBP12.2□□□□□ -0.46
CLCN3-210ENST00000515420 MLIPQ5VWP3 458 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 MED25Q71SY5 747 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 OVCH1Q7RTY7 1134 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 ADCK2Q7Z695 626 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 CCDC91Q7Z6B0 441 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 CEP97Q8IW35 865 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 CTAGE3PQ8IX95 158 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 TMEM102Q8N9M5 508 aaPredicted RBP12.2□□□□□ -0.46
CLCN3-210ENST00000515420 NOA1Q8NC60 698 aaKnown RBP12.2□□□□□ -0.46
CLCN3-210ENST00000515420 C9orf43Q8TAL5 461 aaPredicted RBP12.2□□□□□ -0.46
CLCN3-210ENST00000515420 FBF1Q8TES7 1133 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 SARGQ9BW04 601 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 ATG10Q9H0Y0 220 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 SLC22A11Q9NSA0 550 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 CUEDC1Q9NWM3 386 aaPredicted RBP12.2□□□□□ -0.46
CLCN3-210ENST00000515420 CTNNAL1Q9UBT7 734 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 DMGDHQ9UI17 866 aaKnown RBP12.2□□□□□ -0.46
CLCN3-210ENST00000515420 CDC14AQ9UNH5 594 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 MTO1Q9Y2Z2 717 aaKnown RBP12.2□□□□□ -0.46
CLCN3-210ENST00000515420 OARD1Q9Y530 152 aa12.2□□□□□ -0.46
CLCN3-210ENST00000515420 MED13Q9UHV7 2174 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 H7BY64 318 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 PRPF4O43172 522 aaKnown RBP eCLIP12.19□□□□□ -0.46
CLCN3-210ENST00000515420 PIAS1O75925 651 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 EIF2S1P05198 315 aaKnown RBP12.19□□□□□ -0.46
CLCN3-210ENST00000515420 ANXA5P08758 320 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 NPPBP16860 134 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 PHBP35232 272 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 GRK3P35626 688 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 PGGT1BP53609 377 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 ATP6V0D1P61421 351 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 CSNK1G2P78368 415 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 NFKB2Q00653 900 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 FAM53BQ14153 422 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 ZNF460Q14592 562 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 USP10Q14694 798 aaKnown RBP12.19□□□□□ -0.46
CLCN3-210ENST00000515420 CDKL4Q5MAI5 379 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 TCTN3Q6NUS6 607 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 COX15Q7KZN9 410 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 ARHGEF39Q8N4T4 335 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 CSNK1A1LQ8N752 337 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 PPM1NQ8N819 430 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 ABHD11Q8NFV4 315 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 ANKRD49Q8WVL7 239 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 PTERQ96BW5 349 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 CABS1Q96KC9 395 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 C10orf90Q96M02 699 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 PRAP1Q96NZ9 151 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 FUT8Q9BYC5 575 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 ZNF304Q9HCX3 659 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 ABCF3Q9NUQ8 709 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 IKZF3Q9UKT9 509 aa12.19□□□□□ -0.46
CLCN3-210ENST00000515420 RUVBL1Q9Y265 456 aaKnown RBP12.19□□□□□ -0.46
CLCN3-210ENST00000515420 PTRH2Q9Y3E5 179 aaKnown RBP12.19□□□□□ -0.46
CLCN3-210ENST00000515420 PCDHGA9Q9Y5G4 932 aaKnown RBP12.19□□□□□ -0.46
CLCN3-210ENST00000515420 IGLV3-12A0A075B6K2 115 aa12.18□□□□□ -0.46
CLCN3-210ENST00000515420 CCDC189A1A4V9 331 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms