RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 TRIOBPQ9H2D6 2365 aa2.46□□□□□ -2.01
NEDD4-211ENST00000514893 ACSL3O95573 720 aa2.46□□□□□ -2.02
NEDD4-211ENST00000514893 CCR3P51677 355 aa2.46□□□□□ -2.02
NEDD4-211ENST00000514893 DCDC1P59894 354 aa2.46□□□□□ -2.02
NEDD4-211ENST00000514893 TSTQ16762 297 aaKnown RBP2.46□□□□□ -2.02
NEDD4-211ENST00000514893 ZNF530Q6P9A1 599 aaPredicted RBP2.46□□□□□ -2.02
NEDD4-211ENST00000514893 TMTC3Q6ZXV5 915 aa2.46□□□□□ -2.02
NEDD4-211ENST00000514893 TMPRSS11BQ86T26 416 aa2.46□□□□□ -2.02
NEDD4-211ENST00000514893 DGAT2Q96PD7 388 aa2.46□□□□□ -2.02
NEDD4-211ENST00000514893 TBC1D17Q9HA65 648 aa2.46□□□□□ -2.02
NEDD4-211ENST00000514893 CUTCQ9NTM9 273 aa2.46□□□□□ -2.02
NEDD4-211ENST00000514893 ZNF148Q9UQR1 794 aa2.46□□□□□ -2.02
NEDD4-211ENST00000514893 TMEM221A6NGB7 291 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 TCP11X1B4DZS4 312 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 VILLO15195 856 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 IGHV2-70P01814 119 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 ATP1B1P05026 303 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 ZNF853P0CG23 659 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 HNRNPKP61978 463 aaKnown RBP eCLIP2.45□□□□□ -2.02
NEDD4-211ENST00000514893 SRSF9Q13242 221 aaKnown RBP eCLIP2.45□□□□□ -2.02
NEDD4-211ENST00000514893 SIX1Q15475 284 aaPredicted RBP2.45□□□□□ -2.02
NEDD4-211ENST00000514893 ARHGAP22Q7Z5H3 698 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 MMD2Q8IY49 270 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 FBXO39Q8N4B4 442 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 OR4Q3Q8NH05 313 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 ITLN1Q8WWA0 313 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 METTL21AQ8WXB1 218 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 SFXN2Q96NB2 322 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 CCDC3Q9BQI4 270 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 EBF4Q9BQW3 602 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 MARCH7Q9H992 704 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 Q9N2K0 584 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 KRT84Q9NSB2 600 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 TMED3Q9Y3Q3 217 aa2.45□□□□□ -2.02
NEDD4-211ENST00000514893 IGHV3-16A0A0C4DH30 117 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 RSPH10B2B2RC85 870 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 F8VVB4 439 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 F8VWA3 439 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 MEIS2O14770 477 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 RSPH10BP0C881 870 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 ADORA3P0DMS8 318 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 HAPLN1P10915 354 aaPredicted RBP2.44□□□□□ -2.02
NEDD4-211ENST00000514893 EDNRAP25101 427 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 GIFP27352 417 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 CHRNA3P32297 505 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 TIMM50Q3ZCQ8 353 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 GPR33Q49SQ1 333 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 ZCCHC12Q6PEW1 402 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 IGFL2Q6UWQ7 119 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 IKBIPQ70UQ0 350 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 PXKQ7Z7A4 578 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 GPC2Q8N158 579 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 MMP27Q9H306 513 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 PLAGL1Q9UM63 463 aa2.44□□□□□ -2.02
NEDD4-211ENST00000514893 A0A1B0GTH9 108 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 UMPSP11172 480 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 ZNF17P17021 662 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 TRAP1Q12931 704 aaKnown RBP2.43□□□□□ -2.02
NEDD4-211ENST00000514893 ALDH1L2Q3SY69 923 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 EMBQ6PCB8 327 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 PAMR1Q6UXH9 720 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 CPXCR1Q8N123 301 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 C1orf131Q8NDD1 294 aaKnown RBP2.43□□□□□ -2.02
NEDD4-211ENST00000514893 OR4K1Q8NGD4 311 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 KIAA1524Q8TCG1 905 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 SCFD2Q8WU76 684 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 SLC22A18Q96BI1 424 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 MS4A10Q96PG2 267 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 KCNMB3Q9NPA1 279 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 LUZP4Q9P127 313 aa2.43□□□□□ -2.02
NEDD4-211ENST00000514893 SLC33A1O00400 549 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-211ENST00000514893 QDPRP09417 244 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 LAMP2P13473 410 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 ATP1A3P13637 1013 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 IRF2P14316 349 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 ELK1P19419 428 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 ARL3P36405 182 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 MATKP42679 507 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 GSK3BP49841 420 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 VAMP7P51809 220 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 MFAP4P55083 255 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 MAMLD1Q13495 774 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 MCMDC2Q4G0Z9 681 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 FGD3Q5JSP0 725 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 ZNF506Q5JVG8 444 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 RNASEH2BQ5TBB1 312 aaKnown RBP2.42□□□□□ -2.02
NEDD4-211ENST00000514893 CEP57Q86XR8 500 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 LRRC49Q8IUZ0 686 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 NFAM1Q8NET5 270 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-211ENST00000514893 U2AF1L4Q8WU68 220 aaKnown RBP2.42□□□□□ -2.02
NEDD4-211ENST00000514893 PIK3R3Q92569 461 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 SYN2Q92777 582 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-211ENST00000514893 SLAMF9Q96A28 289 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 CDCA3Q99618 268 aaPredicted RBP2.42□□□□□ -2.02
NEDD4-211ENST00000514893 OPA3Q9H6K4 179 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 ARHGEF38Q9NXL2 777 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 SAGE1Q9NXZ1 904 aa2.42□□□□□ -2.02
NEDD4-211ENST00000514893 RNF103O00237 685 aa2.41□□□□□ -2.02
NEDD4-211ENST00000514893 TMEM44Q2T9K0 475 aa2.41□□□□□ -2.02
NEDD4-211ENST00000514893 OR4A47Q6IF82 309 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms