RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 LSSP48449 732 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 CCR8P51685 355 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 GFERP55789 205 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 PPP1CAP62136 330 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 CSNK1G2P78368 415 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 ZNF33BQ06732 778 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 BST1Q10588 318 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 STX3Q13277 289 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 SPIDRQ14159 915 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 AMZ1Q400G9 498 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 PRAMEF9Q5VWM5 478 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 CES4AQ5XG92 561 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 GRHL2Q6ISB3 625 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 IRGCQ6NXR0 463 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 RNF165Q6ZSG1 346 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 TAX1BP1Q86VP1 789 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 LSMEM2Q8N112 164 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 DEFB124Q8NES8 71 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 AGAP11Q8TF27 550 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 ZNF75CPQ92670 426 aaPredicted RBP11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 THAP11Q96EK4 314 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 TCTN2Q96GX1 697 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 TMEM74Q96NL1 305 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 TGM7Q96PF1 710 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 PAIP2Q9BPZ3 127 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 NUDT22Q9BRQ3 303 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 DPH7Q9BTV6 452 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 ACAT2Q9BWD1 397 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 SLC29A3Q9BZD2 475 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 ZNF768Q9H5H4 540 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 NOL11Q9H8H0 719 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 EML4Q9HC35 981 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 THAP1Q9NVV9 213 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 TRPS1Q9UHF7 1281 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 SH2B3Q9UQQ2 575 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 APOBEC2Q9Y235 224 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 CHD6Q8TD26 2715 aa11.51□□□□□ -0.57
PDLIM5-220ENST00000514830 IGHV5-10-1A0A0J9YXX1 117 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 TRBC2A0A5B9 178 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 WDR91A4D1P6 747 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 H0YIV9 168 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 UBFD1O14562 309 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 HGSO14964 777 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 CDH1P12830 882 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 JUPP14923 745 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 MAGP20916 626 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 CDH3P22223 829 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 SERPINB1P30740 379 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 ARRB2P32121 409 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 SLC1A6P48664 564 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 ATP1A2P50993 1020 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 CCNG1P51959 295 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 PDX1P52945 283 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 CDH13P55290 713 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 ABCE1P61221 599 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 YBX1P67809 324 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 SH3BP2P78314 561 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 SHC2P98077 582 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 REEP5Q00765 189 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 INSM1Q01101 510 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 OCRLQ01968 901 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 IRF8Q02556 426 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 CHIT1Q13231 466 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 TSTA3Q13630 321 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 DOC2AQ14183 400 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 ARL13AQ5H913 290 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 PAGE2BQ5JRK9 111 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 FCRL6Q6DN72 434 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 FIGLAQ6QHK4 219 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 RBM44Q6ZP01 1051 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 ZCCHC23Q6ZST2 131 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 GPRIN3Q6ZVF9 776 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 USP53Q70EK8 1073 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 RNF44Q7L0R7 432 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 TMPRSS9Q7Z410 1059 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 LAS2Q8IYD9 372 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 D2HGDHQ8N465 521 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 C19orf47Q8N9M1 422 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 OR52B6Q8NGF0 335 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 PPP1R14CQ8TAE6 165 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 TRPC4APQ8TEL6 797 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 DYDC1Q8WWB3 177 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 UBE2E3Q969T4 207 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 C7orf26Q96N11 449 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 MAP3K3Q99759 626 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 AIF1LQ9BQI0 150 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 ACTR8Q9H981 624 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 SEMA4BQ9NPR2 832 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 CUEDC1Q9NWM3 386 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 GEMIN8Q9NWZ8 242 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 PSD3Q9NYI0 1048 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 ZNF225Q9UK10 706 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 PILRAQ9UKJ1 303 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 PPT2Q9UMR5 302 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 RAP2CQ9Y3L5 183 aa11.5□□□□□ -0.57
PDLIM5-220ENST00000514830 ATRXP46100 2492 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 IGHV5-51A0A0C4DH38 117 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 SERTM1A2A2V5 107 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 H7BY64 318 aa11.49□□□□□ -0.57
PDLIM5-220ENST00000514830 GIPC1O14908 333 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms