RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 DLGAP4Q9Y2H0 992 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 WBP11Q9Y2W2 641 aaKnown RBP8.08□□□□□ -1.12
RNF4-220ENST00000513578 HEBP2Q9Y5Z4 205 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 GMEB1Q9Y692 573 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 FANCMQ8IYD8 2048 aa8.08□□□□□ -1.12
RNF4-220ENST00000513578 A0A096LPI6 279 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 PRSS38A1L453 326 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 PIPSLA2A3N6 862 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 NVLO15381 856 aaKnown RBP8.07□□□□□ -1.12
RNF4-220ENST00000513578 NARSO43776 548 aaKnown RBP8.07□□□□□ -1.12
RNF4-220ENST00000513578 PGRP06401 933 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 UMPSP11172 480 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 CHRNB1P11230 501 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 ACP5P13686 325 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 HOXB9P17482 250 aaPredicted RBP8.07□□□□□ -1.12
RNF4-220ENST00000513578 GSTM2P28161 218 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 NDUFS1P28331 727 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 OXTRP30559 389 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 SLC7A1P30825 629 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 TRPC1P48995 793 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 GSK3BP49841 420 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 ACSM2AQ08AH3 577 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 LRRC74AQ0VAA2 488 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 LRRC32Q14392 662 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 MLF2Q15773 248 aaPredicted RBP8.07□□□□□ -1.12
RNF4-220ENST00000513578 MAPKAPK3Q16644 382 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 CATSPEREQ5SY80 951 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 IER5LQ5T953 404 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 ACSM2BQ68CK6 577 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 SLC2A7Q6PXP3 512 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 CHST15Q7LFX5 561 aaPredicted RBP8.07□□□□□ -1.12
RNF4-220ENST00000513578 TMPRSS11BQ86T26 416 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 DHFR2Q86XF0 187 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 PROSER1Q86XN7 944 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 KRT78Q8N1N4 520 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 PQLC1Q8N2U9 271 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 BHLHE22Q8NFJ8 381 aaPredicted RBP8.07□□□□□ -1.12
RNF4-220ENST00000513578 OR8J2Q8NGG1 315 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 OR52E4Q8NGH9 312 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 OR2L8Q8NGY9 312 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 HUS1BQ8NHY5 278 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 PYDC1Q8WXC3 89 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 KLK6Q92876 244 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 POP5Q969H6 163 aaKnown RBP8.07□□□□□ -1.12
RNF4-220ENST00000513578 CXorf40BQ96DE9 158 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 ERLEC1Q96DZ1 483 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 BMFQ96LC9 184 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 APOLD1Q96LR9 279 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 WDR92Q96MX6 357 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 CAMK1GQ96NX5 476 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 OR2M4Q96R27 311 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 CGREF1Q99674 301 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 TACO1Q9BSH4 297 aaKnown RBP8.07□□□□□ -1.12
RNF4-220ENST00000513578 ALG2Q9H553 416 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 KIR3DX1Q9H7L2 352 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 RMND5AQ9H871 391 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 DMRT3Q9NQL9 472 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 TM7SF3Q9NS93 570 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 ARMC1Q9NVT9 282 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 PACSIN3Q9UKS6 424 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 SUFUQ9UMX1 484 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 DUSP12Q9UNI6 340 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 PRKAB1Q9Y478 270 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 NEUROG3Q9Y4Z2 214 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 PCDHB3Q9Y5E6 796 aa8.07□□□□□ -1.12
RNF4-220ENST00000513578 A0A1W2PPV9 198 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 TCRBV21S2A2A0A5A6 115 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 POM121BA6NF01 834 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 MAGEB17A8MXT2 336 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 C9JVG2 144 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 SLC31A1O15431 190 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 PRICKLE3O43900 615 aaPredicted RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 SEMA3DO95025 777 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 SEMA4FO95754 770 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 ASGR2P07307 311 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 ACADSP16219 412 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 HOXB6P17509 224 aaKnown RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 HRH2P25021 359 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 TACR1P25103 407 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 PTX3P26022 381 aaPredicted RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 HTR1BP28222 390 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 PKLRP30613 574 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 TIA1P31483 386 aaKnown RBP eCLIP8.06□□□□□ -1.12
RNF4-220ENST00000513578 AKT2P31751 481 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 ACSL1P33121 698 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 S100A3P33764 101 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 RPL3P39023 403 aaKnown RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 GSTM5P46439 218 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 RAB28P51157 221 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 DGKQP52824 942 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 ARFIP1P53367 373 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 RAE1P78406 368 aaKnown RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 ABATP80404 500 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 REEP5Q00765 189 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 LIPEQ05469 1076 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 CAPRIN1Q14444 709 aaKnown RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 SLBPQ14493 270 aaKnown RBP eCLIP8.06□□□□□ -1.12
RNF4-220ENST00000513578 FAM174BQ3ZCQ3 159 aa8.06□□□□□ -1.12
RNF4-220ENST00000513578 AASDHQ4L235 1098 aaPredicted RBP8.06□□□□□ -1.12
RNF4-220ENST00000513578 RUNDC3AQ59EK9 446 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms