RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 ZFYVE21Q9BQ24 234 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 C19orf43Q9BQ61 176 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 RAB11FIP5Q9BXF6 653 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 VN1R1Q9GZP7 353 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 C10orf88Q9H8K7 445 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 NLE1Q9NVX2 485 aaPredicted RBP9.91□□□□□ -0.82
CLDND1-227ENST00000513452 NENFQ9UMX5 172 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 RUVBL1Q9Y265 456 aaKnown RBP9.91□□□□□ -0.82
CLDND1-227ENST00000513452 KLK4Q9Y5K2 254 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 STAB1Q9NY15 2570 aa9.91□□□□□ -0.82
CLDND1-227ENST00000513452 A0A0A6YYC8 382 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-227ENST00000513452 OR51F1A6NGY5 319 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 H0YGG7 62 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 H7C0S8 307 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 I3L1I5 382 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-227ENST00000513452 TFECO14948 347 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-227ENST00000513452 KLK8O60259 260 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 NME2P1O60361 137 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 INHBBP09529 407 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 OR56A5P0C7T3 313 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 NME2P22392 152 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 RFC3P40938 356 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 EMP3P54852 163 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 ARF3P61204 181 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-227ENST00000513452 PMPCAQ10713 525 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 GTF3C1Q12789 2109 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 SPARCL1Q14515 664 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 ITIH4Q14624 930 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 MINDY4Q4G0A6 757 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 ITPRIPL1Q6GPH6 555 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 DENND5AQ6IQ26 1287 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 UNC5DQ6UXZ4 953 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 RBM43Q6ZSC3 357 aaKnown RBP9.9□□□□□ -0.82
CLDND1-227ENST00000513452 CXXC5Q7LFL8 322 aaKnown RBP9.9□□□□□ -0.82
CLDND1-227ENST00000513452 CCDC50Q8IVM0 306 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 SLC5A8Q8N695 610 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 CSNK1A1LQ8N752 337 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 SYN2Q92777 582 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-227ENST00000513452 ARSGQ96EG1 525 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 OLFM1Q99784 485 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 TBL1YQ9BQ87 522 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 DRC3Q9H069 523 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 TP63Q9H3D4 680 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-227ENST00000513452 DDX56Q9NY93 547 aaKnown RBP9.9□□□□□ -0.82
CLDND1-227ENST00000513452 C19orf25Q9UFG5 118 aaPredicted RBP9.9□□□□□ -0.82
CLDND1-227ENST00000513452 L3MBTL1Q9Y468 752 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 HYOU1Q9Y4L1 999 aa9.9□□□□□ -0.82
CLDND1-227ENST00000513452 A0A0U1RQJ8 604 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 OR2A25A4D2G3 310 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 USP27XA6NNY8 438 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 HACD1B0YJ81 288 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 OR1I1O60431 355 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 RBL1P28749 1068 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 CCR7P32248 378 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 BDKRB1P46663 353 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 DLX5P56178 289 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 NUP107P57740 925 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 YBX1P67809 324 aaKnown RBP9.89□□□□□ -0.83
CLDND1-227ENST00000513452 PRPSAP1Q14558 356 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 EXT1Q16394 746 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 FIGNQ5HY92 759 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 ZNF468Q5VIY5 522 aaPredicted RBP9.89□□□□□ -0.83
CLDND1-227ENST00000513452 LRRC38Q5VT99 294 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 LRRC8BQ6P9F7 803 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 ACRBPQ8NEB7 543 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 SPATA3Q8NHX4 192 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 CDKN2AIPNLQ96HQ2 116 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 NAP1L5Q96NT1 182 aaPredicted RBP9.89□□□□□ -0.83
CLDND1-227ENST00000513452 CYTH2Q99418 400 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 DPH7Q9BTV6 452 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 ACAT2Q9BWD1 397 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 SYNPO2LQ9H987 977 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 EDARQ9UNE0 448 aa9.89□□□□□ -0.83
CLDND1-227ENST00000513452 AAR2Q9Y312 384 aaKnown RBP9.89□□□□□ -0.83
CLDND1-227ENST00000513452 A0A1B0GTH6 734 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 H7C0C1 242 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 FOXS1O43638 330 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 PRMT3O60678 531 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 VPS26AO75436 327 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 HEXAP06865 529 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 TPH1P17752 444 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 MSNP26038 577 aaKnown RBP9.88□□□□□ -0.83
CLDND1-227ENST00000513452 ATP5OP48047 213 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 SNTB1Q13884 538 aaKnown RBP9.88□□□□□ -0.83
CLDND1-227ENST00000513452 CCSMST1Q4G0I0 132 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 FBXO42Q6P3S6 717 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 TTC23LQ6PF05 361 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 PAMR1Q6UXH9 720 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 CAMKMTQ7Z624 323 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 ANKRD37Q7Z713 158 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 SHISA5Q8N114 240 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 RAB42Q8N4Z0 105 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 MYRIPQ8NFW9 859 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 OR2A1Q8NGT9 310 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 GOT1L1Q8NHS2 421 aaPredicted RBP9.88□□□□□ -0.83
CLDND1-227ENST00000513452 SLC35G2Q8TBE7 412 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 LKAAEAR1Q8TD35 194 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 ASZ1Q8WWH4 475 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 MBD6Q96DN6 1003 aa9.88□□□□□ -0.83
CLDND1-227ENST00000513452 MMP25Q9NPA2 562 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms