RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 EXD3Q8N9H8 876 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 OR56A3Q8NH54 315 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 PROKR1Q8TCW9 393 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 OR4K3Q96R72 315 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 EGFL8Q99944 293 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 NLNQ9BYT8 704 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 SEMA4CQ9C0C4 833 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 DERL2Q9GZP9 239 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 PCBD2Q9H0N5 130 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 IFT80Q9P2H3 777 aaPredicted RBP13.36□□□□□ -0.27
DDX41-212ENST00000511040 GPN3Q9UHW5 284 aaPredicted RBP13.36□□□□□ -0.27
DDX41-212ENST00000511040 NOVA2Q9UNW9 492 aaKnown RBP13.36□□□□□ -0.27
DDX41-212ENST00000511040 SEC16AO15027 2179 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 NCF1BA6NI72 391 aaPredicted RBP13.35□□□□□ -0.27
DDX41-212ENST00000511040 EIF4E1BA6NMX2 242 aaKnown RBP13.35□□□□□ -0.27
DDX41-212ENST00000511040 NCF1CA8MVU1 366 aaPredicted RBP13.35□□□□□ -0.27
DDX41-212ENST00000511040 DSCR3O14972 297 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 RAB40ALP0C0E4 278 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 NCF1P14598 390 aaPredicted RBP13.35□□□□□ -0.27
DDX41-212ENST00000511040 EZRP15311 586 aaKnown RBP13.35□□□□□ -0.27
DDX41-212ENST00000511040 CD1DP15813 335 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 NPPBP16860 134 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 GCGRP47871 477 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 OR1D4P47884 311 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 ARSFP54793 590 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 CSNK1G2P78368 415 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 OR4D1Q15615 310 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 ZKSCAN8Q15776 578 aaPredicted RBP13.35□□□□□ -0.27
DDX41-212ENST00000511040 HKDC1Q2TB90 917 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 NKAIN1Q4KMZ8 207 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 MROH9Q5TGP6 573 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 BORAQ6PGQ7 559 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 LCTLQ6UWM7 567 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 SYVN1Q86TM6 617 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 GSPT2Q8IYD1 628 aaKnown RBP13.35□□□□□ -0.27
DDX41-212ENST00000511040 ATL1Q8WXF7 558 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 ANKRD7Q92527 254 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 EXT2Q93063 718 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 RERGQ96A58 199 aaPredicted RBP13.35□□□□□ -0.27
DDX41-212ENST00000511040 TSNARE1Q96NA8 513 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 OR2A5Q96R48 311 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 CYTH2Q99418 400 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 MACROD1Q9BQ69 325 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 DPH2Q9BQC3 489 aaPredicted RBP13.35□□□□□ -0.27
DDX41-212ENST00000511040 TSPYL1Q9H0U9 437 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 ACSS3Q9H6R3 686 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 SLC22A11Q9NSA0 550 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 TCFL5Q9UL49 500 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 OARD1Q9Y530 152 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 MAU2Q9Y6X3 613 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 IGSF10Q6WRI0 2623 aa13.35□□□□□ -0.27
DDX41-212ENST00000511040 ATRXP46100 2492 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 A0A1B0GX78 115 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 FEZF1A0PJY2 475 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 HMX2A2RU54 273 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 FITM1A5D6W6 292 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 P2RX6O15547 441 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 CNOT3O75175 753 aaKnown RBP13.34□□□□□ -0.27
DDX41-212ENST00000511040 FAM153BP0C7A2 387 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 SLC35E2BP0CK96 405 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 CCND1P24385 295 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 CCR10P46092 362 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 MEF2AQ02078 507 aaPredicted RBP13.34□□□□□ -0.27
DDX41-212ENST00000511040 DLG1Q12959 904 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 UGT8Q16880 541 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 PRTGQ2VWP7 1150 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 FAM153CQ494X1 144 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 FBXO48Q5FWF7 155 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 TEX35Q5T0J7 233 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 ADAMTSL2Q86TH1 951 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 GPSM1Q86YR5 675 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 PTERQ96BW5 349 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 CABS1Q96KC9 395 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 C10orf90Q96M02 699 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 CATSPER2Q96P56 530 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 HAUS8Q9BT25 410 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 L2HGDHQ9H9P8 463 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 TMEM184CQ9NVA4 438 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 RUVBL1Q9Y265 456 aaKnown RBP13.34□□□□□ -0.27
DDX41-212ENST00000511040 PTRH2Q9Y3E5 179 aaKnown RBP13.34□□□□□ -0.27
DDX41-212ENST00000511040 MDC1Q14676 2089 aaKnown RBP13.34□□□□□ -0.27
DDX41-212ENST00000511040 CCDC88CQ9P219 2028 aa13.34□□□□□ -0.27
DDX41-212ENST00000511040 ATMQ13315 3056 aa13.33□□□□□ -0.27
DDX41-212ENST00000511040 POC1B-GALNT4F8VUJ3 575 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 ANXA5P08758 320 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 HRH2P25021 359 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 CRABP2P29373 138 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 OTX2P32243 289 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 BCL6P41182 706 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 GDF5P43026 501 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 POLE2P56282 527 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 ATP6V0D1P61421 351 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 IRF9Q00978 393 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 FAM214AQ32MH5 1076 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 CRTC2Q53ET0 693 aaPredicted RBP13.33□□□□□ -0.28
DDX41-212ENST00000511040 CATSPEREQ5SY80 951 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 YOD1Q5VVQ6 348 aaPredicted RBP13.33□□□□□ -0.28
DDX41-212ENST00000511040 COX15Q7KZN9 410 aa13.33□□□□□ -0.28
DDX41-212ENST00000511040 THOC6Q86W42 341 aaKnown RBP13.33□□□□□ -0.28
DDX41-212ENST00000511040 WBP1Q96G27 269 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms