RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CSNK1A1LQ8N752 337 aa15.09■□□□□ 0.01
RAB40C-202ENST00000509637 SKA2Q8WVK7 121 aaPredicted RBP15.09■□□□□ 0.01
RAB40C-202ENST00000509637 PANX3Q96QZ0 392 aa15.09■□□□□ 0.01
RAB40C-202ENST00000509637 BAG1Q99933 345 aaPredicted RBP15.09■□□□□ 0.01
RAB40C-202ENST00000509637 TSSK1BQ9BXA7 367 aa15.09■□□□□ 0.01
RAB40C-202ENST00000509637 HES7Q9BYE0 225 aa15.09■□□□□ 0.01
RAB40C-202ENST00000509637 TGIF2Q9GZN2 237 aa15.09■□□□□ 0.01
RAB40C-202ENST00000509637 MRPS30Q9NP92 439 aaKnown RBP15.09■□□□□ 0.01
RAB40C-202ENST00000509637 SPATA7Q9P0W8 599 aa15.09■□□□□ 0.01
RAB40C-202ENST00000509637 TAC3Q9UHF0 121 aa15.09■□□□□ 0.01
RAB40C-202ENST00000509637 ANAPC5Q9UJX4 755 aa15.09■□□□□ 0.01
RAB40C-202ENST00000509637 SH2B3Q9UQQ2 575 aa15.09■□□□□ 0.01
RAB40C-202ENST00000509637 FAM169AQ9Y6X4 670 aa15.09■□□□□ 0.01
RAB40C-202ENST00000509637 TRAV17A0A0B4J275 112 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 E7ENX8 843 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 C19orf84I3L1E1 186 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 HAT1O14929 419 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 AVILO75366 819 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 USP1O94782 785 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 UNC5CO95185 931 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 GAS8O95995 478 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 SNRPB2P08579 225 aaKnown RBP15.08■□□□□ 0
RAB40C-202ENST00000509637 PTMSP20962 102 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 CMPK1P30085 196 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 PER3P56645 1201 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 TAP2Q03519 686 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 PRDX1Q06830 199 aaKnown RBP15.08■□□□□ 0
RAB40C-202ENST00000509637 ART3Q13508 389 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 AARS2Q5JTZ9 985 aaKnown RBP15.08■□□□□ 0
RAB40C-202ENST00000509637 HIBCHQ6NVY1 386 aaPredicted RBP15.08■□□□□ 0
RAB40C-202ENST00000509637 ZNF549Q6P9A3 640 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 GFRALQ6UXV0 394 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 NCCRP1Q6ZVX7 275 aaPredicted RBP15.08■□□□□ 0
RAB40C-202ENST00000509637 VN1R4Q7Z5H5 301 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 SYCE1Q8N0S2 351 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 ZNF295-AS1Q8N0V1 137 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 ZNF480Q8WV37 535 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 MMABQ96EY8 250 aaPredicted RBP15.08■□□□□ 0
RAB40C-202ENST00000509637 YIPF2Q9BWQ6 316 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 PAK5Q9P286 719 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 CSMD2Q7Z408 3487 aa15.08■□□□□ 0
RAB40C-202ENST00000509637 F8W8V4 182 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 DNAJB6O75190 326 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 SLC16A8O95907 504 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 ELAVL4P26378 380 aaKnown RBP15.07■□□□□ 0
RAB40C-202ENST00000509637 PPARGP37231 505 aaPredicted RBP15.07■□□□□ 0
RAB40C-202ENST00000509637 CCNFP41002 786 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 CA7P43166 264 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 CLCN7P51798 805 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 KIF5AQ12840 1032 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 ICE2Q659A1 982 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 TTC23LQ6PF05 361 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 LRRC6Q86X45 466 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 REXO1L1PQ8IX06 675 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 AGGF1Q8N302 714 aaeCLIP15.07■□□□□ 0
RAB40C-202ENST00000509637 ADAMTS18Q8TE60 1221 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 SMPDL3AQ92484 453 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 VN1R1Q9GZP7 353 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 EIF2B3Q9NR50 452 aaKnown RBP15.07■□□□□ 0
RAB40C-202ENST00000509637 ABI3Q9P2A4 366 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 PCYOX1Q9UHG3 505 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 F8P00451 2351 aa15.07■□□□□ 0
RAB40C-202ENST00000509637 TRGV8A0A0C4DH27 118 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 DYTNA2CJ06 578 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 CCL21O00585 134 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 KPNA5O15131 536 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 SEC24DO94855 1032 aaPredicted RBP15.06■□□□□ 0
RAB40C-202ENST00000509637 IPO7O95373 1038 aaKnown RBP15.06■□□□□ 0
RAB40C-202ENST00000509637 HEXBP07686 556 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 ATP5DP30049 168 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 NPY2RP49146 381 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 TERF1P54274 439 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 PNLIPRP1P54315 467 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 KRTAP10-9P60411 292 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 TSTA3Q13630 321 aaPredicted RBP15.06■□□□□ 0
RAB40C-202ENST00000509637 C3AR1Q16581 482 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 CCNG2Q16589 344 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 ZXDCQ2QGD7 858 aaPredicted RBP15.06■□□□□ 0
RAB40C-202ENST00000509637 ANKRD20A4Q4UJ75 823 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 ANKRD22Q5VYY1 191 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 MRGPRGQ86SM5 289 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 OR9A4Q8NGU2 314 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 SIGLEC12Q96PQ1 595 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 IL22Q9GZX6 179 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 RNF32Q9H0A6 362 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.06■□□□□ 03e-7■■■■□ 21.9
RAB40C-202ENST00000509637 SH3BGRL2Q9UJC5 107 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 MKL2Q9ULH7 1088 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 SOX13Q9UN79 622 aa15.06■□□□□ 0
RAB40C-202ENST00000509637 DRG1Q9Y295 367 aaKnown RBP15.06■□□□□ 0
RAB40C-202ENST00000509637 GTF3C1Q12789 2109 aa15.05■□□□□ 0
RAB40C-202ENST00000509637 H7BY64 318 aa15.05■□□□□ -0
RAB40C-202ENST00000509637 WFS1O76024 890 aa15.05■□□□□ -0
RAB40C-202ENST00000509637 PKMP14618 531 aaKnown RBP15.05■□□□□ -0
RAB40C-202ENST00000509637 RPA3P35244 121 aaPredicted RBP15.05■□□□□ -0
RAB40C-202ENST00000509637 TIAL1Q01085 375 aaKnown RBP eCLIP15.05■□□□□ -0
RAB40C-202ENST00000509637 CUL1Q13616 776 aa15.05■□□□□ -0
RAB40C-202ENST00000509637 ZNF630Q2M218 657 aaPredicted RBP15.05■□□□□ -0
RAB40C-202ENST00000509637 SEL1L2Q5TEA6 688 aa15.05■□□□□ -0
RAB40C-202ENST00000509637 H3F3CQ6NXT2 135 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms