RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 TMEM79Q9BSE2 394 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 NDC1Q9BTX1 674 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 POPDC3Q9HBV1 291 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 GPAMQ9HCL2 828 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 SLC6A20Q9NP91 592 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 STARD5Q9NSY2 213 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 ABCF3Q9NUQ8 709 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 PCMTD2Q9NV79 361 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 STOX2Q9P2F5 926 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 NDOR1Q9UHB4 597 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 TUBD1Q9UJT1 453 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 EMCNQ9ULC0 261 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 PLCL2Q9UPR0 1127 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 PADI2Q9Y2J8 665 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 PCDHGA6Q9Y5G7 932 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 ZNF462Q96JM2 2506 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 SPTA1P02549 2419 aa8.39□□□□□ -1.07
PDLIM5-213ENST00000509357 A0A096LPK6 155 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 LRRC14BA6NHZ5 514 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 ARGFXA6NJG6 315 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 TARM1B6A8C7 271 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 E7ENX8 843 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 EIF3FO00303 357 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 RECKO95980 971 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 CATP04040 527 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 FURINP09958 794 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 RAB40ALP0C0E4 278 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 ENO3P13929 434 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 STMN1P16949 149 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 EPORP19235 508 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 PHBP35232 272 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 RPA3P35244 121 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 RORAP35398 523 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 IL2P60568 153 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 DCDP81605 110 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 TAP2Q03519 686 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 UGT8Q16880 541 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 LACTB2Q53H82 288 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 LCN10Q6JVE6 187 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 UGT3A1Q6NUS8 523 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 TLDC1Q6P9B6 456 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 EMBQ6PCB8 327 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 FIGLAQ6QHK4 219 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 TIFABQ6ZNK6 161 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 MCATQ8IVS2 390 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 TMEM151BQ8IW70 566 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 DTWD1Q8N5C7 304 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 OR2A1Q8NGT9 310 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 HMGCLL1Q8TB92 370 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 THAP4Q8WY91 577 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.38□□□□□ -1.078e-7■■■■■ 60.7
PDLIM5-213ENST00000509357 ESAMQ96AP7 390 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 MOCOSQ96EN8 888 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 ABHD17AQ96GS6 310 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 ACAT2Q9BWD1 397 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 NLNQ9BYT8 704 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 DERL2Q9GZP9 239 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 CHRNA10Q9GZZ6 450 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 TSPYL1Q9H0U9 437 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 ATG10Q9H0Y0 220 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 SPNS1Q9H2V7 528 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 ACSS2Q9NR19 701 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 CUEDC1Q9NWM3 386 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 UTP6Q9NYH9 597 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 SPATA7Q9P0W8 599 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 IFT80Q9P2H3 777 aaPredicted RBP8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 TBK1Q9UHD2 729 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 SRPK3Q9UPE1 567 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 KCNMB2Q9Y691 235 aa8.38□□□□□ -1.07
PDLIM5-213ENST00000509357 CCDC88CQ9P219 2028 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 BOD1L1Q8NFC6 3051 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 PABPN1LA6NDY0 278 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 SMIM23A6NLE4 172 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 ZNF839A8K0R7 811 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 PYCARD-AS1I3L0S3 204 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 GOLGA8RI6L899 631 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 UBXN8O00124 270 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 CTSVO60911 334 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 MED26O95402 600 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 GUCA1CO95843 209 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 EIF2S1P05198 315 aaKnown RBP8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 INHBAP08476 426 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 CD63P08962 238 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 H2AFXP16104 143 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 CMPK1P30085 196 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 OTX2P32243 289 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 GDF5P43026 501 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 MSH2P43246 934 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 GLRBP48167 497 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 AGTR2P50052 363 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 CCL11P51671 97 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 PNLIPRP1P54315 467 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 ARSFP54793 590 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 VSX2P58304 361 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 TBPL1P62380 186 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 ZNF844Q08AG5 666 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 CHAF1BQ13112 559 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 IL10RAQ13651 578 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 SLC9A5Q14940 896 aa8.37□□□□□ -1.07
PDLIM5-213ENST00000509357 NCF4Q15080 339 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms